Detailed information on CNT30263845


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30312316Brassica rapaCamelina sativa9891.7187.46343forward
CNT3017802Brassica rapaZea mays5246.7981.32182forward
CNT30648253Brassica rapaRosa chinensis67.4335.3883.05236forward
CNT30688678Brassica rapaTriticum urartu5832.4382.76203forward
CNT3023412Brassica rapaPopulus trichocarpa49.4330.6282.08173forward
CNT30497803Brassica rapaDigitaria exilis60.5729.4982.08212forward

Expression of CNT30263845

Peptides detected in this lncRNA

>peptide 1 (33 aa)
MLDCRRVKLDCNSGMLGCSLETLDCSLETLGYS*

Sequence

>CNT30263845
CTGTAGTTTGGAGATGTAGGACTGTAAGGGCTAGCTGGTGATAGTCTTGCATTGCTAGGGGAGTAAGCCAGAGATGGACTGTATTTAGCAGACTGAGGGT
TGTAGCTTGGAGACGTCGGACCGTAACTAGGAGACGTTGGACTGTAGCTTGGAGATGTAGGGCTGTACCCAGGAGATGTAGGGCTGTATGCAGGTGAAGT
AGGACTGTAAGAAGGAGATGTTGGACTGTAGGAGGGTGAAGTTGGACTGTAACTCGGGGATGTTGGGCTGTAGCTTGGAGACGTTGGACTGTAGCTTGGA
GACGTTGGGCTATAGCTAGGAGACGTTGGGCTGTAGCTAGGGGAGGTGGG