Detailed information on CNT30225406


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30691376Hordeum vulgareOryza sativa34.712.3486.8476forward
CNT30671299Hordeum vulgareSetaria viridis40.6429.8784.2789forward
CNT30161998Hordeum vulgarePistacia vera37.98.785.5483forward
CNT3085275Hordeum vulgareVigna radiata36.5312.948580forward
CNT30539350Hordeum vulgareBrassica napus44.2914.8584.5497forward
CNT30552540Hordeum vulgareOryza glaberrima40.649.288.7689forward
CNT30252935Hordeum vulgareAvena sativa37.918.8690.3683forward
CNT30140477Hordeum vulgareLolium perenne40.6415.8693.2689forward
CNT30647723Hordeum vulgareRosa chinensis44.2941.9985.5797forward
CNT30722298Hordeum vulgareTriticum spelta44.2912.6591.7597forward
CNT30426981Hordeum vulgarePapaver somniferum38.8121.4184.7185forward
CNT30706971Hordeum vulgarePrunus avium44.2910.6588.6697forward
CNT3037416Hordeum vulgareCucumis melo37.912.5286.7583forward
CNT3049292Hordeum vulgareCucumis sativus37.913.1585.5483forward

Expression of CNT30225406

Peptides detected in this lncRNA

>peptide 1 (71 aa)
STSTLEEGLGTLLSQDLIESIQGALVLDSLPGGGAIGWGGGSSQARRLRSFRSCRERERGGLALRGGGIYAS

Sequence

>CNT30225406
TTAGCACCAGCACCCTTGAAGAGGGACTTGGCACCCTCCTTAGCCAGGATCTGATTGAAAGCATCCAAGGAGCTCTTGTACTTGACAGCCTCCCCGGAGG
CGGGGCGATAGGCTGGGGTGGTGGCTCTTCCCAGGCTCGGCGGCTCCGCTCCTTCAGGTCTTGCAGAGAGAGAGAGAGGGGTGGCCTGGCGCTGCGGGGC
GGGGGAATATATGCGAGTG