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Detailed information on CNT30647723


BLAST search results

BLAST vs Swiss-Prot:
sp|P31167|ADT1_ARATH, E-value = 6e-38

BLAST vs NONCODE:
NONPOPT000078, E-value = 2e-47

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30691376Rosa chinensisOryza sativa25.549.5893.2259forward
CNT3089948Rosa chinensisSolanum tuberosum22.0811.0294.1251forward
CNT30225406Rosa chinensisHordeum vulgare41.9944.2985.5797forward
CNT30606478Rosa chinensisGossypium raimondii21.2123.1195.9249forward
CNT30722298Rosa chinensisTriticum spelta47.1914.2187.16109forward
CNT30354966Rosa chinensisLactuca sativa45.0228.4284.62104forward
CNT30570934Rosa chinensisVitis vinifera46.3232.4287.85107forward
CNT30100415Rosa chinensisOryza rufipogon40.6913.1582.9894forward

Expression of CNT30647723

Peptides detected in this lncRNA

>peptide 1 (75 aa)
KELLYLTASPEDVCTSTLEQGLGTLILQDLSEGIKRTLVLDGFTGGHHHSSTNSVNWVGSKTSTISDDPSKSKASK

Sequence

>CNT30647723
CAAAAGAACTCTTGTACTTGACGGCTTCACCGGAGGATGTTTGCACCAGCACCCTTGAACAGGGACTTGGCACCCTCATTCTTCAAGATCTGAGTGAAGG
CATCAAAAGAACTCTTGTACTTGACGGCTTCACCGGAGGTCATCATCATTCTTCTACGAACAGTGTCAATTGGGTAGGAAGCAAGACCAGCACCATTAGT
GATGACCCATCCAAGAGCAAAGCTAGCAAAG