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Detailed information on CNT30151711


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30676412Brachypodium distachyonSetaria viridis26.6750.9890.38104forward
CNT30378461Brachypodium distachyonArabidopsis thaliana44.111.185.47172forward
CNT30538058Brachypodium distachyonBrassica napus4021.1183.97156forward
CNT30235076Brachypodium distachyonBrassica oleracea4019.483.97156forward
CNT3061541Brachypodium distachyonArabidopsis lyrata36.9219.8387.5144forward
CNT3078686Brachypodium distachyonBrassica juncea4033.6983.33156forward
CNT30259795Brachypodium distachyonBrassica rapa4018.5583.33156forward
CNT3017229Brachypodium distachyonZea mays44.167.7287.79172forward
CNT30479003Brachypodium distachyonArabidopsis halleri36.9234.286.11144forward
CNT30366386Brachypodium distachyonSorghum bicolor36.9220.9986.11144forward
CNT30114546Brachypodium distachyonEutrema salsugineum42.3122.7982.42165forward

Expression of CNT30151711

Peptides detected in this lncRNA

>peptide 1 (66 aa)
MCFGRDATSTLLASLMSSSVRRLMKTGFPRHFTVTVVPGSMLDRSTSREARASTSLLADILRTNFKT

Sequence

>CNT30151711
GTCCCAGAATATCAGTTTCAAAAACATACATTTCAGTAGCAACATAGTAGAAATAATTATTTTTGCACTGCAAAATGCACTTTGGTAGACAACAGGATCT
TCACTGTGACAATAGTCGTTAAGTAAAACTTCTAGCCACATCGAAAACAAAATAACAGCGCAACAGGGATTCACCCCTGTGGAGAACATGTGTTTTGGTA
GGGATGCAACATCCACACTGTTGGCCAGTTTAATGTCGTCATCCGTTCGTCGCCTGATGAAGACTGGCTTTCCACGCCACTTCACAGTCACCGTGGTGCC
AGGTTCGATGCTGGATAGATCAACCTCAAGGGAAGCAAGGGCAAGCACATCCTTACTTGCCGACATACTCAGGACAAACTTCAAGACAAG