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Detailed information on CNT30147201


BLAST search results

BLAST vs Swiss-Prot:
sp|P33560|TIP_ANTMA, E-value = 1e-41

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30376051Medicago truncatulaArabidopsis thaliana20.2911.9285.5797forward
CNT30727261Medicago truncatulaCorchorus capsularis31.827.2986.18152forward
CNT30631843Medicago truncatulaVigna unguiculata5052.8887.45239forward
CNT30486882Medicago truncatulaOlea europaea33.6814.5781.37161forward
CNT30561384Medicago truncatulaActinidia chinensis22.1836.4383.02106forward
CNT30627409Medicago truncatulaDaucus carota28.0321.3486.57134forward
CNT30358120Medicago truncatulaLactuca sativa33.6815.5183.85161forward
CNT30644098Medicago truncatulaCannabis sativa24.2741.4381.03116forward
CNT3022241Medicago truncatulaPopulus trichocarpa56.2827.6583.27269forward
CNT30724248Medicago truncatulaLupinus angustifolius29.541.4783.69141forward

Expression of CNT30147201

Peptides detected in this lncRNA

>peptide 1 (46 aa)
MFSVHEHIAIDKPSQTTTNKRPSPIDPVVMEISTNNCRPKRSCRVH*

Sequence

>CNT30147201
GCTTAGGAATCGGCCTTTGATGAGTGGTCCACGCTGGGAACGAGGGCCGCCGCAGTGTACTGGAATGTAGCTCCGTCGTGTGGGGGTTGAGGGTTTTATG
GATGGAGAAGAGTGGGAACAAGAATCACATACATAACATAGCCAATAACAATAAGTTAATAATTCAATAAAATCAAAAGTCACTGGAAAGAGGTGCATGT
TCAGTGTGCATGAACACATTGCCATAGATAAGCCCAGCCAAACCACCACCAATAAGAGGCCCAGCCCAATAGATCCAGTTGTCATGGAAATTTCCACTAA
CAACTGCAGGCCCAAAAGATCTTGCCGGGTTCATTGACCCGCCAGAGAATGGGCCTGCAGCCAATATGTTGGCACCAACAATGAAACCAATGGCAATGGG
TGCAATTGTGCCTATTGACCCTTTCTTTGGATCAGCTGCTGTGGCATAAACTGTGTATACCAAACCAAATGTTATGAT