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Detailed information on CNT30486882


BLAST search results

BLAST vs Swiss-Prot:
sp|P21653|TIP1_TOBAC, E-value = 3e-48

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30727261Olea europaeaCorchorus capsularis13.6727.1180.79151forward
CNT30628730Olea europaeaVigna unguiculata16.240.1386.03179forward
CNT30147201Olea europaeaMedicago truncatula14.5733.6881.37161forward
CNT30627409Olea europaeaDaucus carota13.2123.2584.93146forward

Expression of CNT30486882

Peptides detected in this lncRNA

>peptide 1 (40 aa)
LIKIYKLKSKGRELHKHKYLPIIKILKDILLGLEVGHMIQ*

>peptide 2 (31 aa)
MLDKKRERMNFNLMGFQTKGKTTQIRVEFKC*

>peptide 3 (30 aa)
MQLIQKMSIFLIAKGSKDLKMSNFSALPSK*

Sequence

>CNT30486882
TCCTGATCAAAATATACAAACTCAAAAGCAAAGGTAGAGAATTACATAAGCACAAGTACTTGCCAATAATAAAAATTCTTAAGGATATTCTTCTTGGACT
GGAAGTGGGGCATATGATCCAATAAAAACATCACCATATACCAGTTCTGAGAGAAGTCGACTGCGGCAACGGCTGGCCCAAATGATCGGGCCGGGTTCAT
CGATCCACCACTAAATGGGCCAGCGGCTAAAATGTTTGCACCCACAATGAACCCAATTGCAATGGGTGCAATTGTGCCCAACGAGCCTTTTTTGGGGTCC
GCAGCAGTGGCATAGACTGTGTAGACCAAAGCAAAAGTGATGACAATCTCCATTACAACACCCTCCACAGCATTCATACCAGAAGCAACTGCATGAGTGG
GAATGGCCTGCCAAACATCAAATATTAGTATGGTTTGGGCTTACCACATTCAGGCAAAAGCCCATCTTGATTCAATCTAGCGATAGTCTAGGCCCTTGTT
TGGGATCCATTATTTCGAATTATAATGAAAAGAATAGTAATTTTTTGAAGAATGTGTGGTTAAATAGAAAGGAAAAGTATTTAAGTTTACGTGTAATATT
GTTTTATTGAAAAATGTATGCTTGATAAAAAGAGAGAGAGAATGAATTTTAATTTAATGGGGTTTCAAACAAAGGGTAAAACTACTCAAATTCGAGTAGA
ATTTAAATGCTAATTCAATGAAATACTTGAACTCCAGTCTTTAATGTATCAGGTGATGTTTTGTAAGGTTTTTGTCTAGTCGAACACGAACTACTCAAAC
AATTTGAGTAATTTCTTGTGACCTCAGTTATTAAAGCTTAACGAACCTATAATGAATTGAGTTGACGTTTCAATTTAGAAGTCGATTTTACATAAATTAT
GACTTGTTTTGGTCCAACATCAGAGTAGACAAGCTGTTTTCTATCTTATATCAATCAGAAAATAATTAAAAATAAGCTTCAACATGCAGTTAATCCAAAA
GATGAGTATTTTTCTTATCGCGAAAGGCTCTAAAGATCTCAAAATGAGCAATTTTAGTGCTTTACCCTCAAAATAAGTTTAATTTTAATCTTGGTATAAC
TTACC