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Detailed information on CNT30627409


BLAST search results

BLAST vs Swiss-Prot:
sp|Q9ATL8|TIP22_MAIZE, E-value = 9e-63

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30673906Daucus carotaSetaria viridis26.1125.9981.1164forward
CNT30519799Daucus carotaSetaria italica19.4320.383.61122forward
CNT30376051Daucus carotaArabidopsis thaliana23.8918.4382.67150forward
CNT30628730Daucus carotaVigna unguiculata19.928.0387.2125forward
CNT30486882Daucus carotaOlea europaea23.2513.2184.93146forward
CNT30147201Daucus carotaMedicago truncatula21.3428.0386.57134forward
CNT30256642Daucus carotaAvena sativa28.3434.5680.34178forward
CNT30364799Daucus carotaSorghum bicolor27.0722.3482.35170forward
CNT30358120Daucus carotaLactuca sativa26.5916.0981.44167forward
CNT30644098Daucus carotaCannabis sativa23.4152.585.03147forward
CNT3022241Daucus carotaPopulus trichocarpa26.4317.0683.13166forward
CNT30101968Daucus carotaOryza rufipogon23.7319.6180.54149forward

Expression of CNT30627409

Sequence

>CNT30627409
TTTTTTTTAGATGAATGTCGTTACCATGATAATTTTGTTTGACAACTTTAAGTAATGATGAACAATAAGAATGTCTGAATAAATAATTTATCAACACTTC
TTTCTTGTTCACAAAAGGAACAAGAGAACAAACTCGATAGCAACCTCTCAAAGCATCATAAAAGAGAACAGAACATAACCACAACTTTTTAACCAACAAC
AAAGACAAGACACAAAAGAAAATGCAATAATTAAGCATAATCTTCAGCAATGGGAGCATACGATCCAATGAAGACATCTCCGTAGACAAGCCCAGCTAAG
CCTCCACCAATGAGTGGGCCAACCCAGTAGATCCAGTGTCCAGAGAAATCAAAACTGGCCACAGCAGGGCCGAATGATCGGGCCGGGTTCATTGAGCCAC
CGCTGAATGGGCCAGCAGCCAAAATGTTGGCACCAACGATGAAACCAATGGCAATGGGTGCAATGGTGCCTAGTGAGCCCTTTTTGGGATCCGCGGCTGT
GGCGTAAACGGTGTAGACAAGGGCAAAGGTGATAACGATCTCGAACACTACGCCTTCGGCTGCACCCAAGCCGGCTCCGACTCCGTGGGTTGGGATGGCC
TGTCACGAAAACCGAACCGAAATTAATA