Detailed information on CNT30724248


BLAST search results

BLAST vs Swiss-Prot:
sp|Q41951|TIP21_ARATH, E-value = 6e-26

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30727261Lupinus angustifoliusCorchorus capsularis20.5912.5788.5770forward
CNT30631843Lupinus angustifoliusVigna unguiculata52.6539.683.24179forward
CNT30147201Lupinus angustifoliusMedicago truncatula41.4729.583.69141forward

Expression of CNT30724248

Peptides detected in this lncRNA

>peptide 1 (30 aa)
MDQQLRYWVSCCSIHSVDQCKCDNDLSHNSF

>peptide 2 (45 aa)
RVGNTTVGHVIFIHYKDNNHLNKSKISSQWCMVRGKEYIAIDSTS*

Sequence

>CNT30724248
ACAGAGTTGGAAACACCACGGTGGGACATGTAATCTTCATCCATTACAAAGACAATAATCATCTAAACAAATCAAAAATCAGTAGCCAATGGTGCATGGT
CAGAGGGAAGGAATATATAGCCATAGATAGCACCAGCTAAACCACCACCAATCAAAGGTCCAACCCAATAGATCCAGTGACCACTGAAGTTACCACTAAC
AACTGCAGGACCAAATGATCTAGCAGGGTTCATTGAGCCACCAGAGAATGGACCAGCAGCTAAGATATTGGGTCAGCTGCTGTAGCATACACAGTGTAGA
CCAATGCAAATGTGATAATGATCTCAGTCACAACTCCTTC