« Back to Vigna unguiculata search


Detailed information on CNT30631843


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30147201Vigna unguiculataMedicago truncatula52.885087.45239forward
CNT30724248Vigna unguiculataLupinus angustifolius39.652.6583.24179forward

Expression of CNT30631843

Peptides detected in this lncRNA

>peptide 1 (31 aa)
MNPCYTEIISVLVLNTKPLQHTTNLFEFSPN*

>peptide 2 (74 aa)
MNYTGHDFSMKSKFRGKRCMVRANEHIAIDETSQTTTNKRSNPVDPVVMEVTTHNCRPKGACRVHRPTREWSCC*

Sequence

>CNT30631843
CTCAATCATAAATCGTTTAGATCGTTAACTGATGAATCCTTGTTACACAGAGATAATCTCTGTGCTGGTTCTCAATACTAAACCTTTACAGCACACCACC
AACCTCTTTGAATTCTCACCAAATTAAACAGTAGCACACTTTACAAATAAATTACAAGAAGCAAAAGCATACAATAGAAAAAAAAAAGCATGAATTACAC
AGGCCATGATTTCTCAATGAAGTCAAAATTCAGAGGAAAGAGGTGCATGGTCAGAGCGAATGAACACATTGCCATAGATGAGACCAGCCAAACCACCACC
AATAAGAGGTCCAACCCAGTAGATCCAGTTGTCATGGAAGTCACCACTCACAACTGCAGGCCCAAAGGAGCGTGCAGGGTTCATCGACCCACCAGAGAAT
GGTCCTGCTGCTAAAATATTCGCACCAACAATGAAACCAATGGCAATGGGTG