Detailed information on CNT30224038


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30188045Hordeum vulgareSecale cereale89.328.6694.13409forward
CNT30137714Hordeum vulgareLolium perenne33.848.4783.23155forward

Expression of CNT30224038

Peptides detected in this lncRNA

>peptide 1 (63 aa)
MALVVDLDTTSKEVWKKNLAWPITTTKTEEKKSRSGARDLKRPGDLTVCWVNKGTNRGGRKRG*

>peptide 2 (55 aa)
LMNKKESCLVSKPKPRTGREKSTTATAKRDGVGGRSRHDEQGGVEKEPRLADYYN*

Sequence

>CNT30224038
CTGATGAACAAGAAAGAAAGCTGCCTGGTTTCCAAACCAAAACCTAGAACAGGCAGAGAAAAATCAACAACGGCCACAGCAAAAAGAGATGGCGTTGGTG
GTAGATCTAGACACGACGAGCAAGGAGGTGTGGAAAAAGAACCTCGCCTGGCCGATTACTACAACTAAAACAGAAGAAAAAAAGAGCAGATCTGGAGCCC
GGGATCTAAAACGTCCTGGAGACCTCACTGTCTGCTGGGTGAACAAGGGGACGAACAGGGGAGGGAGGAAGAGGGGTTGAGACTCAGAGAACCTTACCTT
GGCGACGCAAGAACTCGCTCGGATCTATGCTTACCTCGCTCGAACTCACGTGAGTGTTTGTGGTTGCTGGGATTGGGGCTTTTTCGGTGGCTGGTGGCTG
TGGAATGCGTGTGTGTGTGTGTGGACGAAGGTGGGAGTGGGCGAAATGGAGGCGGGGA