Detailed information on CNT30136398


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30678070Lolium perenneSetaria viridis33.6613.2410069forward
CNT30709004Lolium perenneGlycine max26.8320.4587.2755forward
CNT3099067Lolium perenneSolanum tuberosum39.515.9283.9581reverse complement
CNT30562915Lolium perenneActinidia chinensis38.5434.6588.6179forward
CNT30440804Lolium perenneAegilops tauschii23.923.997.9649reverse complement
CNT301559Lolium perenneZea mays37.077.3492.1176forward
CNT30624589Lolium perenneDaucus carota36.5915.1286.6775forward
CNT30688502Lolium perenneTriticum urartu20.982.0297.6743reverse complement
CNT30720027Lolium perenneTriticum spelta44.8845.193.4892forward
CNT3040646Lolium perenneMarchantia polymorpha34.1522.589070forward

Expression of CNT30136398

Peptides detected in this lncRNA

>peptide 1 (65 aa)
ADELLRAVKFPARVADLDAGLPDVDRDALPHLRVGGGRSSTRSGGCEVGSGSGRRKETGGSSRRL*

>peptide 2 (49 aa)
MPACPMWIEMHSLIFESGVGGARRDLGAVKWGAGAGGGRRRADRAGVCED

Sequence

>CNT30136398
CCGCTGATGAGCTGCTCAGGGCAGTAAAGTTCCCAGCACGCGTTGCCGACCTGGATGCCGGCCTGCCCGATGTGGATCGAGATGCACTCCCTCATCTTCG
AGTCGGGGGTGGGCGGAGCTCGACGAGATCTGGGGGCTGTGAAGTGGGGAGCGGGAGCGGGAGGAGGAAGGAGACGGGCGGATCGAGCCGGCGTTTGTGA
AGACG