CANTATAdb - search

Detailed information on CNT30678070

BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)

Target	Query species	Target species	Query coverage (%)	Target coverage (%)	Identity	Alignment length (nt)	Orientation
CNT30136398	Setaria viridis	Lolium perenne	13.24	33.66	100	69	forward

Expression of CNT30678070

Peptides detected in this lncRNA

>peptide 1 (67 aa)
MPACPMWIEMHSLIFLPDSPQATGGETFGSSDEPLEAIGGGGEGRGSGADRSIGSGRGALAFVKTPR*

Sequence

>CNT30678070
AGATGGAACCAACAGTAATTAACCGAGATACTGATTCCATTACAACATGGTATTAAAGCAGTTCAACAAGCAACGGTGAAGCAAACACCAACATAACAAA
CAGCCCAAGAGGCAATATCAAAAGAGTTTTCGACACCGCGACAGATGTCATCCACAGATTGACGACACAACCGATACCTGCAAGCCGATCACGATCAGTA
CTCCTCGTCCTCCTCATCATCGTCACCACCGCCCTCAGCGCCGACCTCCTCGTAGTCCTTCTCCAGGGCCGCCAGCTCCCAGCACGCGTTGCCGACCTGG
ATGCCGGCCTGCCCGATGTGGATCGAGATGCACTCCCTCATCTTCCTCCCCGACTCGCCTCAAGCAACCGGGGGCGAAACCTTCGGGTCAAGCGACGAAC
CTCTCGAAGCGATCGGAGGCGGAGGCGAGGGAAGAGGGAGCGGAGCGGATCGATCGATCGGGAGTGGAAGGGGAGCGCTGGCGTTTGTGAAGACGCCGAG
GTGAGGAGAGGGGAGGCGGCC