Detailed information on CNT30688502


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30283899Triticum urartuTriticum aestivum5.2733.4394.64112forward
CNT30395293Triticum urartuTriticum turgidum17.456.7596.76370forward
CNT30660094Triticum urartuTriticum dicoccoides10.3933.3395.93221forward
CNT30136398Triticum urartuLolium perenne2.0220.9897.6743reverse complement

Expression of CNT30688502

Peptides detected in this lncRNA

>peptide 1 (59 aa)
MDLSCARRHPGRQRVLGTLLPRARHPGSSYPISRLSPLIMSTRMRLLGCVDWLERVSHH*

>peptide 2 (57 aa)
MRFREEMLLRAYTSSYVSSRLDLPYSPRFTLLLVVPRPLAPACFFCCTMLTLLLVSI*

>peptide 3 (29 aa)
MQGLLESTEKGRVRRLIGSSLPWSHDFPS*

>peptide 4 (84 aa)
MYVYFISSLSLRSPPNEFLCSIWISRLIPGPDVQVQPHPPHRPRVRCPVCARYQRSSMLKKIEDTCRAIGLTPGQCIMCRACIC*

>peptide 5 (73 aa)
MYLYYLLLLLIYRHVCMFTSFLPCLSDPLLMNFFVRFGLAGSSLDQMFKYSPIHRIDLESGAQFVLATKGAPC*

>peptide 6 (44 aa)
MIDVALVSVVEEERGCIYITCFCCLYIDMYVCLLHFFLVSPIPS*

>peptide 7 (55 aa)
MIFRVDGSFLCTPASRSATCAGNFTASSTASRFVIPHLPPLAPYHVDSYAVARMC*

>peptide 8 (39 aa)
MFWPSFVHVYNKHPECSFSSVLITLLVLFTCIQINTLGY*

>peptide 9 (42 aa)
MLVGCSLVSLNLVIRNFNVVILQCTMVSCFYCESNVNGVARF*

>peptide 10 (35 aa)
MNSETITSIRQQLFLSGVANLALESLLCTYPIVHN*

Sequence

>CNT30688502
TTAATTATTGCAAGTCGTGACTGTCATGTGTATGTTATGAATTCAGAAACTATAACATGTTTTTTTGCCACGGTGAAGGAGTAAACTGAACAATTAAGTT
GCTAGTTCAGTATGTGAGTTGCATCATACTGTACATGAATGCTAGCTGAATATCAGTTCTGTATGTTACTTGGTGCATAACTTTTACTTATTTGCAAGTC
GTAGCTGCCGTGCACCCGTTATGAATTCAGAAACTATAACATCAATTCGTCAACAGCTTTTTCTTAGTGGAGTTGCTAATTTGGCGCTGGAAAGCTTGCT
TTGCACATATCCCATTGTACATAATTAATATTGGATTAGTTACTTGCTTTTGGACACATGCTAGTGGGATGTTCTCTAGTTTCTCTAAATCTAGTGATTC
GAAACTTCAATGTAGTCATTTTACAATGCACCATGGTTTCTTGTTTCTATTGTGAAAGTAATGTCAATGGTGTTGCACGGTTCTGAATAAAAATGAAAAT
GGCTTGTGAATGTGAATGAACTTACAATATCAGTCTCTTAGAGTTGTTTTTGCAACCTAATATTGTTGTAATCCTTTCCTTGAGCTGCGGTTGATGTGGT
GGTCTGCTGTTGTGGATGATACATGCAGGGGCTGCTGGAGAGCACGGAGAAGGGCAGGGTCCGGAGGCTGATAGGCTCAAGCCTCCCGTGGAGCCATGAT
TTTCCGAGTTGATGGATCTTTCCTGTGCACGCCGGCATCCAGGTCGGCAACGTGTGCTGGGAACTTTACTGCCTCGAGCACGGCATCCAGGTTCGTCATA
CCCCATCTCCCGCCTCTCGCCCCTTATCATGTCGACTCGTATGCGGTTGCTCGGATGTGTTGATTGGTTAGAGAGGGTTTCCCATCATTGATCTTCTCTG
GTTTCGAATATTTAGGCTGTAATTGATGCGCAATTTGAGCTATGATGGGATTACTCAATTACCTTTCTGTGTAGGTCTAGTTGTTTTCACGCGAGGATGC
GCCAATTAGTGTTCGATCCACGCGACCCTTCTGAATTGCCTGATGGCCAGGCAAACAGTGACAAGACCATCCGGTGATTCGCTGCTTGCAAACAACAGCT
AGTAAATCGGTCATCGTGGGGGCGGGGACATGAGATTCAGAGAAGAGATGCTGCTGCGTGCCTATACTAGTTCATATGTATCCAGCCGCCTAGATCTACC
ATACTCACCTCGTTTCACTTTGCTACTAGTAGTTCCTAGGCCATTAGCTCCTGCTTGCTTTTTTTGCTGCACAATGCTGACTTTGCTGCTAGTGTCCATT
TAGTAGTTTTTTAACTATGTTTTGGCCTAGTTTTGTTCACGTGTATAATAAGCATCCTGAATGCTCATTTAGCAGTGTATTAATAACACTGCTAGTTTTG
TTCACGTGTATTCAGATTAATACACTTGGCTATTAAACTGCACAATGCTCATCCTATTGGCTACTTGTCGATGTTCTCCGCATAACTATAGGCTGCCATG
TCTTTTCCACTTTCCTTTTCGCTTTCTGTAATGCTAACTTGACAGTAACCCTATAGTTTGTTGGTTGTTGCAACCCAGCAGCGGCGCTTCCATTTTAACG
CATGTACTAGTGTGCTAAAACTTGCAAAAGACACAAATCTTGAACTTTCTTTGTCGGCTTGTTGCTGCTGCTCCTTGTGTACAATGATTGATGTTGCTCT
AGTTAGTGTTGTAGAGGAAGAAAGAGGATGTATTTATATTACTTGCTTCTGCTGCTTATATATAGACATGTATGTATGTTTACTTCATTTCTTCCTTGTC
TCTCCGATCCCCTCCTAATGAATTTCTTTGTTCGATTTGGATTAGCAGGCTCATCCCTGGACCAGATGTTCAAGTACAGCCCCATCCACCGCATCGACCT
AGAGTCAGGTGCCCAGTTTGTGCTCGCTACCAAAGGAGCTCCATGTTGAAGAAGATTGAAGACACTTGTAGAGCTATAGGGTTAACACCAGGGCAATGTA
TCATGTGTAGAGCTTGTATATGTTAGAGCTTACTATGTGTAGAGCTTGTAAAGTATATGTTATTTGTACAATAGGAGCTCTGTACTGAATCTGGCTGATA
ATATTTGGAGTATTATGTGTGTGTTTT