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Detailed information on CNT30590285


BLAST search results

BLAST vs Swiss-Prot:
sp|A0A804KTT0|PIP12_MUSAM, E-value = 1e-103

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30728342Musa acuminataCorchorus capsularis32.5552.5880.4347forward
CNT30504332Musa acuminataNicotiana attenuata8.6326.8288.0492forward
CNT30709876Musa acuminataGlycine max10.3230.8183.64110forward
CNT30560769Musa acuminataActinidia chinensis28.3345.0780.46302forward
CNT30713155Musa acuminataMalus domestica golden8.7236.6187.193forward
CNT30319296Musa acuminataAsparagus officinalis38.659382.04412forward
CNT30116468Musa acuminataOryza nivara30.7746.282.62328forward

Expression of CNT30590285

Peptides detected in this lncRNA

>peptide 1 (37 aa)
MIIPCMALVINNCSSKASGRIDASAGDGDGGQAHESP*

>peptide 2 (38 aa)
MVQPRKSTEEREKELLSVHHPVKSYDRRKKKDHSITSL*

>peptide 3 (40 aa)
TILLQYREPPYSNIATLNIHTRQQLWCNTEKHNGGKPQTR*

>peptide 4 (77 aa)
MPVPVMGMVARHMRVPSTPLGISGREDCVNQDEGANNLSTQATTLGVTRGHNIRSTSIVLIEPLLKPFHHARTAYGT*

Sequence

>CNT30590285
CAACAATTTTGCTGCAATACAGAGAACCACCATATAGCAACATAGCGACATTAAATATACACACTAGGCAACAATTGTGGTGCAATACAGAGAAGCATAA
CGGAGGAAAGCCACAGACAAGATAGATAAAGGAGACACGACAGAGACCAAGAAATTTTAAGAAAGCTCATGGCCTGCTCTTGAATGGGATTGCCCTGATA
ACTATCTGTTGGTACATAGCAGCAAGAGCAGCTCCAATGAATGGTCCAACCCAGAAAATCCACTGAGGAGAGAGAAAAGGAATTGCTTAGTGTTCATCAT
CCTGTCAAAAGCTACGATAGGAGAAAAAAAAAAGATCACTCGATCACTTCCTTGTAGACTTACATGATCATTCCATGCATGGCTCTTGTCATAAACAATT
GCAGCTCCAAGGCTTCTGGCAGGATTGATGCCAGTGCCGGTGATGGGGATGGTGGCCAGGCACATGAGAGTCCCTAGCACTCCTCTTGGCATCAGTGGCA
GAGAAGACTGTGTAAACCAGGATGAAGGTGCCAACAATCTCAGCACCCAAGCCACCACCCTTGGTGTAACCAGGGGCCACAACATTCGCTCCACCTCCAT
TGTTCTCATAGAGCCCCTTCTTAAACCCTTTCACCACGCCCGCACCGCATATGGCACCTAGACACTGCATCACCATGTAGAACAGAGCCCTGGTCAGGGA
CAGCTTCCTGGCCAGGAGCAGCCCAAAGGCCCAGGCAATCCCCTGGATGCCCACGGTGGAGCACTTGGTGTTGGACTTGACCACACCCATGACGGTGAGG
ATGCTGATGTAGAGGAAGAGGAAGGTGGCCATGAATTCTGCTATGCCAGCCCTGTAGAAGGACCATGAGCTGAGCTCCGCTGGCTCAAACAGTGGAGCTG
GTGGTGGCTCCTGGTAGTCCCTGTCCTGACTCTGGGCAGCTGTCCCTATTGCCTGCCTCTCCGAGAACTTGTTTGCTCCCACCCTCACATCCTCCTCTCT
CCCCTCCATCTTACCCCGAGGACACTCTTCTCCGGACTCTAGAACTATATGATGAGCACAGGAAAG