Detailed information on CNT30320106


BLAST search results

BLAST vs Swiss-Prot:
sp|Q06611|PIP12_ARATH, E-value = 2e-101

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30671072Asparagus officinalisSetaria viridis4.6520.3485.5483forward
CNT30159582Asparagus officinalisPistacia vera4.9834.3686.5289forward
CNT30385683Asparagus officinalisTriticum turgidum4.6537.3984.3483forward
CNT30565299Asparagus officinalisActinidia chinensis4.3132.9185.7177forward
CNT30586754Asparagus officinalisMusa acuminata5.2134.4484.9593forward
CNT30436848Asparagus officinalisAegilops tauschii5.4933.3385.7198forward
CNT30254684Asparagus officinalisAvena sativa5.2141.3382.893forward
CNT30713155Asparagus officinalisMalus domestica golden4.4831.58580forward
CNT30680173Asparagus officinalisTriticum urartu5.1537.8685.8792forward

Expression of CNT30320106

Peptides detected in this lncRNA

>peptide 1 (85 aa)
MVDGCNSCSDEGTHPEYPLVVPRRLTWYVALASDHGLLIKSNPRSAWRLKSYWTLAACRSAGFKLTYTMPAYTLMTKFPFQLLAN*

>peptide 2 (48 aa)
MISAPRPALLLYPGFTMLTPPPSISNSADCSPLTIPTPQMAPKHCINM*

>peptide 3 (46 aa)
MAAIAAPMKGPTQNIHWSSHADTYTADQEVSSNQGLVLKGMALMTI*

>peptide 4 (31 aa)
GEQTSSLYSVVLKRKKIHDRLYISLNKAPGF*

>peptide 5 (31 aa)
MPPTAHAMPCNPTLAHAPGERFTPMIVSTVM*

Sequence

>CNT30320106
AGGAGAGCAGACAAGTTCCTTGTATTCAGTAGTATTAAAGAGGAAAAAAATACATGATCGATTGTACATAAGCTTAAACAAAGCCCCCGGTTTTTGAACA
CATACACAGCTGATCAGGAAGTAAGTAGTAATCAGGGCTTGGTTTTAAAGGGGATGGCCCTGATGACAATCTGATGGTAGATGGCTGCAATAGCTGCTCC
GATGAAGGGACCCACCCAGAATATCCACTGGTCGTCCCACGCCGACACATACACAGCTGATCAGGAAGTAAGTAGTAATCAGGGCTTGGTTTTAAAGGGG
ATGGCCCTGATGACAATCTGATGGTAGATGGCTGCAATAGCTGCTCCGATGAAGGGACCCACCCAGAATATCCACTGGTCGTCCCACGCCGTTTGACATG
GTACGTAGCGCTAGCCTCGGACCATGGGCTACTAATTAAGTCAAATCCCAGGTCCGCTTGGCGGTTGAAAAGTTACTGGACCTTGGCAGCGTGCAGATCT
GCAGGCTTTAAGCTAACGTACACCATGCCAGCATATACGCTAATGACAAAATTTCCCTTTCAATTGCTGGCTAATTAACTGTAAAATTTTAACGGCTACT
ATACGTGTAAGCTCATAAGAGAGAAATTTTTTCAACATATCACTCCTTAACACGACTGACATGACTAACACGTCCGGGGGCTGAAAGTATGAACTAGCTG
AAGAGGAGAGGCTATAACTAGTTCGTAACTAACTTCTTATATTTACCTAATTAAATCTGTTCTGTTGATGGCCTTCAGTGTTATCTATCTTAAGCTGATT
TTAATTATATGGTCTTTTTCTTTAGATTTCAGTTGCCAAATTGTGTAGCTGAAACAGAACTAATTAAGGAGCTAGGCAAGTGAGGGATGCTTACGGGGAC
GTGAGAGTCTCGGGCGCTCCTCTTGGCATCAGTTGCGGAGAAGACGGTATAAACGAGGACAAAAGTGCCGATGATCTCGGCCCCAAGGCCAGCGCTTTTG
CTGTATCCGGGGTTCACCATGTTGACACCGCCCCCCAGCATCTCAAACTCCGCCGACTGCAGCCCCTTGACCATTCCAACACCGCAAATGGCACCCAAGC
ACTGCATCAACATGTAAAACACCGCCCTTGGGACCGATAATTTACGGCCCAGCAGCAACCCAAACGTCACCGCAGGGTTTATGTGCCCCCCTGAGAAACA
AATTAATTTTAAAAAAAAAACTCACAATCTCAACACATATTGCCATAATTCTGTCAATTAAGTTTGCTAACCAACATTTTTTTAAGCTTTAACTATACCT
GATATGCCTGCAGTACAGTAGACGAGGACAAAGATCATGCCCCCGACGGCCCATGCGATGCCTTGCAATCCTACGCTAGCGCACGCGCCGGGGGAGCGCT
TCACCCCGATGATCGTAAGCACCGTGATGTAGAGGAACAGGAAGGACGCCACAAACTCTGCGATCCCCGCCCTGTAAAAGGACCAAGAAATTAGCTCCCC
TTGTTCGAAGAGTGGAGCCGGGGGTGGCTCTACGTAGTCTCTAAAGCTCTGTGCTCTCGTCCCTATCGTCTGCTTCTCTGAGAATTTATTTGCTCCTATT
TTGACATCCTCCTCTCTCCCTGCCATGTCGATTCCTAAGTAGCTAGCTAGCTTAATTAAGGTTCTTAAGATAGTCTTATACTTAAGTTACCTGTGAGTGA
GAATGAGAATGGGGAGAATGCCTGTTATATATAGAGTGTGAAGAAGCAAGCTTTACAAGTGGGTAGTTGTGAATAGTATTTCAAAA