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Detailed information on CNT30681640


BLAST search results

BLAST vs Swiss-Prot:
sp|P0DO53|PIP12_MUSAC, E-value = 1e-44

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30676186Triticum urartuSetaria viridis16.9744.1289.45199forward
CNT30709876Triticum urartuGlycine max7.524.6584.0988forward
CNT30290687Triticum urartuTriticum aestivum62.3298.2594.25731forward
CNT30224613Triticum urartuHordeum vulgare12.4553.8790.41146forward
CNT30590202Triticum urartuMusa acuminata19.3525.1182.38227forward
CNT30658930Triticum urartuTriticum dicoccoides19.2794.5699.56226forward
CNT30131632Triticum urartuLolium perenne15.683.5692.35183forward
CNT30232947Triticum urartuAnanas comosus6.0529.9692.9671forward
CNT30713155Triticum urartuMalus domestica golden7.7635.8384.6291forward
CNT30595794Triticum urartuOryza meridionalis11.5962.188.24136forward

Expression of CNT30681640

Peptides detected in this lncRNA

>peptide 1 (31 aa)
HVNNLARFDNNGQHTQLSTDEITYKSWSRFR*

>peptide 2 (38 aa)
MDTQVTVLLPEGSGCVLHRGKSLGISLEIRVGFPHLNN*

>peptide 3 (36 aa)
MRLHTSLGPGSGEYRVHQTWKTNWNSTVTRMTGRDI*

>peptide 4 (40 aa)
MPAGCSYYCCRKQACKCPCFQVQTKERRGVRFQFGFTHVV*

>peptide 5 (38 aa)
MKGPTQKIHCKRENLMDMSALITTISTAMPNNFPDNNL*

Sequence

>CNT30681640
CACGTAAACAACTTGGCTCGATTTGACAATAACGGGCAGCACACACAACTGAGTACTGATGAGATTACATACAAGTCTTGGTCCAGGTTCAGGTGAATAC
AGAGTACATCAAACTTGGAAGACAAATTGGAATTCCACAGTAACACGGATGACGGGAAGAGATATATAGCCGCCTCATCAGAAATTCAGAACACGCAGCT
TGCTCTTCGGGTTGGGTTGAACAGCTGCTTAGGACTTGGTCTTGAACGGGATCGCTCTGATGACCACCTGGTGGTAGACGGCGGCCAGCGCGGCGCCGAT
GAAGGGGCCGACCCAGAAGATCCACTGCAAACGCGAAAATTTGATGGATATGTCAGCCCTTATTACTACTATAAGCACAGCAATGCCAAACAATTTCCCA
GATAATAATCTATAATGGACACTCAAGTCACTGTCCTACTACCAGAAGGCAGCGGTTGCGTGCTACACCGAGGCAAGTCTCTCGGCATTTCCCTTGAGAT
CAGGGTAGGCTTTCCACATTTGAATAACTAGCAGATGATACACTACTATCATCAGCTATAACTGCTCAATTATTGCAGCTACTGCCACATCAGTTCACCA
GATTAATAAGCTTTCCAATTTCACATCGGTTAATTAGGTGTGCAATAGAGAGTAGCTATGCGTCTGCATCAGCTTTAAGTTACTGAATACTACTGCTACC
ACATGCCTGCAGGCTGCAGTTACTACTGCTGCAGAAAACAAGCATGCAAGTGCCCATGCTTTCAAGTTCAGACAAAGGAAAGGAGGGGTGTTAGGTTTCA
GTTTGGGTTCACTCACGTGGTCTGACCAGGCGTGCTCCCTGTTGTAGATGATGGCCGCGCCGAGGCCGGAGCCCTTGGTGTAGCCGGGCGCCACCACGTT
GGCGCCGCCGCCGTTGCCCATGTACAGGCCCTGCTGGAACCCCTTCACCACGCCGGCGCCGCAGATGGCGCCCAGGCACTGCATGATGATGTAGAACACC
GCCCGGGTCAGCGACAGCTTCCTCGCCAGGAACAGCCCGAAGATCATGCCGCCGAAGGACCAGGCGATGCCCTGGATGCCGACGCTGGCGCACTTGGAGG
TGGCGCCGCTGTAGCCCATCACGGTGAGGATGGTGACGTAGAGGAAGAGGAAGGTGGCCATGAACTCGGCGAT