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Detailed information on CNT3094185


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONSTUT002386, E-value = 0.0

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30509954Solanum tuberosumSolanum lycopersicum25.88103.385.47344reverse complement
CNT304854Solanum tuberosumZea mays7.1542.9983.1695forward
CNT30647172Solanum tuberosumRosa chinensis11.3639.7486.09151forward
CNT30685597Solanum tuberosumTriticum urartu6.2541.584.3483forward

Expression of CNT3094185

Peptides detected in this lncRNA

>peptide 1 (49 aa)
MVVFLGIRTVISPPAVSSPSDKGVTSKRRKSLTFTLPSPLRMAACTAAP*

>peptide 2 (47 aa)
MLLQSSFPLKKFCNSSCTLGILVDPPTRTISWTLSLSTLASLKHFSIG

Sequence

>CNT3094185
AAAAAATAAAAGCTAAAAAGGGAAAGTAATCAAACGCTGCTGTCCAAGAACATTTCTCCATTCAGAATGCTCATCTATGCTCCTCCGAAATGGCCCCAAA
TTCTTTAAATTGTTGTTGAACCAGTATTGTTGAGCTTGAGTGAATTCAATAAATACACTTAACATCTCACAAGTGCCATGGAATCAATCTCCTTAAAGAC
TTCTTCAGCTCAAAATGGGTCCCAACAGCAGATCTAGGAGCTTGTAGCCTCGACCCAGCAATCTTCGTCAAGAATCACCCTTGGTGATAAATCCTCTTGA
ATCTTTCCTTCTACGCAGAATGAGCTCCGAAGAACTGATACCACTGTGAAGAGATCCATCTCCAAGAGATATAGGTGTTCATGATTATCAACAGGCGCTT
CGTTGAGATCACTCTATACTCCAGTTAGTTTTGGTTTGAGAGGGGTGCATAAGGGCAGGTCTTATCAAATTTTCACCAAATTCAACGATAAAGACCAAGA
ACAAGTCAATGTACTTCAAAAAGGAAAGCTCAGGTTCTTAAGAGCATTCAGGCTTGATTCGAGGTACCACGCCGGTATAGAAATACTAACAGTTGGCTTG
GATATCACGTCTGATATAAATACTACCCCTGATTGGCTCGGATACCACGCTGATACACTAATAATTTGTGTGTGGATTCTGTGAGAGAACCGAGTATGTG
TAGTTATGATTCCATGAGTGGACCGGGTATTTGTAATTGTGATCATGTGGGACATGTTTCAAGTATTGGTTGATTCAGGATATTGTGATTAGGAGCCTAT
GTATTTGTGATTGTTTTATATGTGTTGTCAAGTGTTTATTGTGTTGTGGCTATCTGTTTACATTCATGATTTAGACTTGGTCGTGTGATCCTACCAATAC
AATGTGATTGTGTATTGATACTACACTTTATTTTTTCTTGTGGAGTACATGACATCTTCCAACGGTTGATATGAGACTTCAGTTAAGGGACGCTTGACTT
CGAATTCAAAGGAATGGTGGTGTTCCTTGGAATCAGGACAGTCATAAGTCCTCCAGCAGTTTCGAGTCCTAGCGATAAAGGGGTGACATCCAAAAGGCGC
AAATCTTTAACTTTCACATTACCCTCTCCACTAAGAATGGCTGCTTGCACAGCAGCGCCATAAGCAACAGCTTCGTCGGGGTTGATGCTCTTGCAAAGTT
CCTTCCCGTTAAAGAAGTTCTGCAACAGCTCCTGCACCTTGGGAATTCTAGTTGATCCACCAACAAGAACGATTTCATGGACACTGTCCTTGTCCACTCT
AGCATCCCTCAAACATTTCTCAATTGGAT