Detailed information on CNT30673431


BLAST search results

BLAST vs Swiss-Prot:
sp|P08222|CB22_CUCSA, E-value = 6e-40

BLAST vs NONCODE:
NONBNAT007398, E-value = 7e-23

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30224983Setaria viridisHordeum vulgare57.9631.6496.37193forward
CNT30393130Setaria viridisTriticum turgidum57.9623.4895.85193forward
CNT30664919Setaria viridisTriticum dicoccoides57.9626.1995.85193forward
CNT30371023Setaria viridisOryza glumipatula57.6634.3595.83192forward
CNT30108138Setaria viridisOryza longistaminata57.6623.795.31192forward
CNT30149001Setaria viridisBrachypodium distachyon56.1645.2891.98187forward
CNT30577669Setaria viridisOryza barthii57.6620.4595.31192forward
CNT30603587Setaria viridisOryza punctata57.9637.9994.3193forward

Expression of CNT30673431

Peptides detected in this lncRNA

>peptide 1 (94 aa)
MVQTETSARSHPDTLQIERCGTDASLAGHEVGGVGPGVVVDGVREVVGEVLERALAGDDGLDEEAEHGEHGEAAVLELLDLELGEGLGLADGLRC

>peptide 2 (35 aa)
MAWTKKPNMENMARRPFLSSLTLSSAKASGLQMACD

Sequence

>CNT30673431
AGGCAATGAACACATCAATTCCTTCTCGGTTGAACCCTCGTAATTTACATGGTACAAACTGAAACCAGTGCGCGCTCACATCCGGACACCCTACAGATCG
AACGGTGTGGCACCGACGCCTCACTTGCCGGGCACGAAGTTGGTGGCGTAGGCCCAGGCGTTGTTGTTGACGGGGTCCGCGAGGTGGTCGGCGAGGTTCT
CGAGCGGGCCCTTGCCGGTGACGATGGCCTGGACGAAGAAGCCGAACATGGAGAACATGGCGAGGCGGCCGTTCTTGAGCTCCTTGACCTTGAGCTCGGC
GAAGGCCTCGGGCTTGCAGATGGCTTGCGATGT