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Detailed information on CNT30603587

BLAST search results

BLAST vs Swiss-Prot:
sp|P10707|CB2D_SOLLC, E-value = 3e-42

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)

Target	Query species	Target species	Query coverage (%)	Target coverage (%)	Identity	Alignment length (nt)	Orientation
CNT30673431	Oryza punctata	Setaria viridis	37.99	57.96	94.3	193	forward
CNT30522718	Oryza punctata	Setaria italica	40.75	28.09	95.17	207	forward
CNT30187975	Oryza punctata	Secale cereale	67.13	40.74	95.31	341	forward
CNT30301046	Oryza punctata	Triticum aestivum	67.13	41.23	95.01	341	forward
CNT30393967	Oryza punctata	Triticum turgidum	67.13	56.83	94.72	341	forward
CNT30552306	Oryza punctata	Oryza glaberrima	98.82	77.71	94.42	502	forward
CNT30251938	Oryza punctata	Avena sativa	66.54	42.73	92.6	338	forward
CNT30665949	Oryza punctata	Triticum dicoccoides	67.13	40.12	95.01	341	forward
CNT30473044	Oryza punctata	Saccharum spontaneum	68.11	39.27	93.06	346	forward
CNT30129613	Oryza punctata	Corymbia citriodora	67.13	46.58	92.67	341	forward
CNT30684690	Oryza punctata	Triticum urartu	65.55	52.52	89.79	333	forward
CNT30345519	Oryza punctata	Eragrostis tef	40.75	35.69	93.72	207	forward
CNT30369202	Oryza punctata	Oryza glumipatula	100.2	57.13	94.3	509	forward
CNT30108138	Oryza punctata	Oryza longistaminata	66.93	41.98	95.29	340	forward
CNT30149001	Oryza punctata	Brachypodium distachyon	38.58	47.46	91.84	196	forward
CNT30103236	Oryza punctata	Oryza rufipogon	66.93	34.45	95.29	340	forward
CNT30574663	Oryza punctata	Oryza barthii	100.2	61.85	93.52	509	forward
CNT30499073	Oryza punctata	Digitaria exilis	66.93	45.64	85.88	340	forward
CNT30115779	Oryza punctata	Oryza nivara	100.2	96.95	94.5	509	forward

Expression of CNT30603587

Peptides detected in this lncRNA

>peptide 1 (74 aa)
MAWTKNPNMENMARRPFLISFTLSSANASGSSARSSGKTQPSAPSMAHRQWITSSSRFLANVSGSADSPAVSQP*

>peptide 2 (71 aa)
FINQPDNIILHNLNERSKYSGTRKVENIYRSRKSLSHRSLPEAMELTAVARRRSTLTCRGRSWWRMPRRCC*

Sequence

>CNT30603587
CTTTCATCAACCAACCAGATAACATTATTTTACACAATCTGAACGAACGAAGCAAATATTCGGGTACGCGGAAAGTGGAGAACATATATCGCTCGCGCAA
AAGCTTGTCTCACCGCAGCCTGCCTGAAGCAATGGAACTCACCGCCGTTGCTCGCCGGAGATCCACACTCACTTGCCGGGGACGAAGTTGGTGGCGTATG
CCCAGGCGTTGTTGTTGACGGGGTCGGCGAGGTGGTCGGCCAAGTTCTCGAGTGGCCCCTTGCCGGTGACGATGGCCTGGACGAAGAATCCGAACATGGA
GAACATGGCGAGGCGGCCGTTCTTGATCTCCTTCACCTTGAGCTCGGCGAACGCCTCGGGGTCGTCGGCGAGGAGCTCCGGGAAGACGCAGCCGAGCGCG
CCGAGCATGGCCCACCGGCAGTGGATCACCTCCAGCTCCCGGTTCTTGGCGAACGTCTCCGGGTCGGCCGACAGCCCGGCGGTGTCCCAGCCGTAGTCGC
CGGGGAAC