Detailed information on CNT30664919


BLAST search results

BLAST vs Swiss-Prot:
sp|P10707|CB2D_SOLLC, E-value = 6e-44

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30673431Triticum dicoccoidesSetaria viridis26.1957.9695.85193forward
CNT30188029Triticum dicoccoidesSecale cereale66.4971.0194.49490forward
CNT30224983Triticum dicoccoidesHordeum vulgare47.7657.795.45352forward
CNT30393906Triticum dicoccoidesTriticum turgidum97.5610098.47719forward
CNT30250314Triticum dicoccoidesAvena sativa53.8760.8991.44397forward
CNT30721767Triticum dicoccoidesTriticum spelta96.7494.9498.46713forward

Expression of CNT30664919

Peptides detected in this lncRNA

>peptide 1 (35 aa)
MQHLPVRTTQSQNGKKQRSTTTHMQQHPSAMKLSA*

>peptide 2 (42 aa)
MACTKKPNMENMARRPFLISFTLSSAKASGSSARPRGLGLPR*

>peptide 3 (61 aa)
MVMRPSPKGAALEAFTGVPAIAGEESAMVAAAIARCVLAGFASGELRLAVGGAGGRWCCGVK

Sequence

>CNT30664919
AGAGAGACAAGTAGTTAACCAGAAGACAGAGATGCCTTGATTAATCTGAGAAAATAGCCAGATATTACACAAACACCATCTTGTAGTGTACACACACCAA
CTCCTCATCTCGACTCGCCCTCACATGCAACATCTACCAGTCCGGACTACTCAATCTCAGAACGGGAAGAAGCAGAGATCGACGACGACACACATGCAGC
AGCATCCATCAGCCATGAAGTTGTCGGCCTAGAGCTTGAGCTGACGGCGCTCACTTGCCGGGGACGAAGTTGGTGGCGAAGGCCCAGGCGTTGTTGTTGA
CGGGGTCGGCGAGGTGGTCGGCGAGGTTCTCGAGGGGGCCCTTGCCGGTGACGATGGCCTGCACGAAGAAGCCGAACATGGAGAACATGGCGAGGCGGCC
GTTCTTGATCTCCTTCACCTTGAGCTCCGCGAAGGCCTCGGGGTCCTCGGCGAGGCCCAGGGGGCTGGGGTTGCCGAGGTAGAGCACGCGGTCGGAGCCG
TACCACGGGCTGCTGGACGCCGCCACCTTGGGCTTGCCCGCCGTCTTGCGCATGGTGATGCGGCCCTCGCCGAAGGGCGCCGCCCTGGAGGCCTTCACCG
GGGTGCCGGCCATCGCCGGGGAGGAGAGCGCCATGGTCGCGGCCGCCATCGCGCGCTGCGTGCTAGCTGGCTTTGCTTCGGGTGAGCTGAGGCTGGCAGT
GGGAGGCGCTGGTGGTCGTTGGTGCTGTGGAGTGAAG