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Detailed information on CNT30382474


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30526259Manihot esculentaPhaseolus vulgaris40.264082.79122forward
CNT30632032Manihot esculentaVigna unguiculata21.4510.8389.2365reverse complement
CNT30718122Manihot esculentaMalus domestica golden30.6930.188.1793forward
CNT30155101Manihot esculentaPrunus persica58.0931.6585.23176forward
CNT30572433Manihot esculentaVitis vinifera26.414.5287.580reverse complement
CNT30706625Manihot esculentaPrunus avium58.429.2584.75177forward

Expression of CNT30382474

Peptides detected in this lncRNA

>peptide 1 (41 aa)
PSQLTWACNPSGGYEVVGRCSNPDGWIRNGYLLARPFQAGS*

>peptide 2 (48 aa)
MKWWDVVPIQMAGFGMAIFWLAHSKQGVEPRDSIESWSFLGPRVESTA*

Sequence

>CNT30382474
GCCGAGCCAGTTGACGTGGGCTTGTAACCCAAGTGGGGGCTATGAAGTGGTGGGACGTTGTTCCAATCCAGATGGCTGGATTCGGAATGGCTATCTTCTG
GCTCGCCCATTCCAAGCAGGGAGTTGAACCAAGAGACTCGATCGAAAGCTGGAGTTTCTTGGGTCCTAGAGTGGAGAGTACCGCGTGAGGCTGGCTTCAC
AGAGCAGCGACCATCTCCCGCTTCCGGCAGTGGAAGGATAACGAGTCGGTGTCACTCGGTTCCACATAGCCACATGGACTGTTCTAATTGGACCACCACT
TTT