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Detailed information on CNT30715637


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30632032Malus domestica goldenVigna unguiculata24.9111.8390.1471forward
CNT30176739Malus domestica goldenVigna angularis28.0725.8987.580reverse complement
CNT3050759Malus domestica goldenCucumis sativus2018.6387.7257reverse complement

Expression of CNT30715637

Peptides detected in this lncRNA

>peptide 1 (33 aa)
VGPIGTVQQAISDPSGTNPLSFHCQEREVVVAL*

>peptide 2 (45 aa)
MSLRPNSTAQLRAWNGRVRIEPRQSRPAEAEPTFQHPDVPTRVTSL

>peptide 3 (43 aa)
LVQLGQSSRPYRIRVAPTRYPSTAKNGRWSLLCEASLPRCPPL*

>peptide 4 (49 aa)
CWSNWDSPAGHIGSEWHQPVILPLPRTGGGRCSVKPAFRGALPSRSREA*

Sequence

>CNT30715637
TGTTGGTCCAATTGGGACAGTCCAGCAGGCCATATCGGATCCGAGTGGCACCAACCCGTTATCCTTCCACTGCCAAGAACGGGAGGTGGTCGTTGCTCTG
TGAAGCCAGCCTTCCGCGGTGCCCTCCCCTCTAGGAGCCGTGAAGCATGAGCCTTCGCCCAAACTCCACGGCACAACTCCGGGCTTGGAACGGGCGGGTT
AGAATAGAGCCACGACAGAGCCGACCCGCTGAGGCCGAACCAACGTTCCAACACCCTGATGTCCCCACTCGGGTTACAAGCTTGC