Detailed information on CNT3088597


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30525117Vigna radiataPhaseolus vulgaris80.517395.89219forward
CNT30631059Vigna radiataVigna unguiculata20.2214.9592.7355forward

Expression of CNT3088597

Peptides detected in this lncRNA

>peptide 1 (75 aa)
RDLGANSSSTNEHSEGQPARDKGGVGITLLDNLLLCLADNVVRVGEGMVVQETLGGGHCAQNSKSSQFLWPVITV*

>peptide 2 (72 aa)
GETLEPTAAAPMSTVRANLRETRVVLASPSWTTCFCALQTMWLGLVRAWWCKKHWVEAIVLKTQNLHSFFGL*

Sequence

>CNT3088597
GGAGAGACCTTGGAGCCAACAGCAGCAGCACCAATGAGCACAGTGAGGGCCAACCTGCGAGAGACAAGGGTGGTGTTGGCATCACCCTCTTGGACAACCT
GCTTCTGTGCCTTGCAGACAATGTGGTTAGGGTTGGTGAGGGCATGGTGGTGCAAGAAACATTGGGTGGAGGCCATTGTGCTCAAAACTCAAAATCTTCA
CAGTTTCTTTGGCCTGTGATTACAGTGTAGTAGGCAAAGTGTTTGTGGACTTTGAAGTGGTTTTGATGCGTG