Detailed information on CNT30610345


BLAST search results

BLAST vs Swiss-Prot:
sp|P93566|PSBP_SOLTU, E-value = 9e-36

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30631059Gossypium raimondiiVigna unguiculata40.6228.2682.69104forward
CNT30709815Gossypium raimondiiGlycine max67.5837.2883.24173forward
CNT30236483Gossypium raimondiiBrassica oleracea58.5916.6783.33150forward
CNT30313622Gossypium raimondiiCamelina sativa58.5924.3986150forward
CNT30263549Gossypium raimondiiBrassica rapa42.9728.2182.73110forward
CNT30132420Gossypium raimondiiLolium perenne38.2815.8683.6798forward
CNT30624588Gossypium raimondiiDaucus carota53.1267.3385.29136forward
CNT30349047Gossypium raimondiiEragrostis tef37.517.0285.4296forward

Expression of CNT30610345

Peptides detected in this lncRNA

>peptide 1 (69 aa)
GKMEYRREELLRGTVVGDGLLVGGSDHDAQIAGGVEVVLIPQHLTWELHLFAWVPFRWYRQLESIPIGS*

Sequence

>CNT30610345
GGGAAAATGGAATACCGAAGAGAGGAACTCCTCAGGGGAACCGTAGTCGGTGATGGACTTCTTGTCGGTGGGAGTGATCATGACGCTCAAATTGCTGGTG
GTGTCGAAGTTGTCCTCATACCTCAGCACTTGACCTGGGAACTCCACCTCTTTGCTTGGGTTCCATTTCGATGGTATCGACAGCTTGAATCCATCCCCAT
TGGTTCATGAGGCCTAAACGTACGGCTGATAAAGAACAAGAAAAAGAAAAAGGAAG