Detailed information on CNT30709815


BLAST search results

BLAST vs Swiss-Prot:
sp|P16059|PSBP_PEA, E-value = 1e-53

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30631059Glycine maxVigna unguiculata37.2847.0189.02173forward
CNT30236483Glycine maxBrassica oleracea25.6513.2282.35119forward
CNT30610345Glycine maxGossypium raimondii37.2867.5883.24173forward

Expression of CNT30709815

Peptides detected in this lncRNA

>peptide 1 (64 aa)
MLVVSSPSWTTCFCALQTMWFGLVLTTKRCDEALVGVVRAWWCKKHCVDAIVLKIFLVSLLLGL*

>peptide 2 (30 aa)
MVVQEALCGCHCAQNLLSFFALGPMNQTLE*

Sequence

>CNT30709815
CCTCAGGTGAACCATAGTCAGTGATGGACTTCTTGTCAGTTGCAGTGACCATGACAGCAACATTGCTGGTTGAGTCAAAATTGTCCTCATATCTAAGAAC
CTGACCTGGGTACTCAACCTCTTTGCTTGGGTTCCACTTTGAGGGAATTGAGAGTTTGAATCCATCCCCATTGTATGGAAGGAAGTCAGTGGCCAACCTG
CGAGAGACAATGTTAGTAGTGTCCTCACCCTCTTGGACAACCTGCTTTTGTGCCTTGCAAACAATGTGGTTTGGTTTGGTGCTCACAACTAAGCGCTGTG
ATGAAGCTCTGGTTGGAGTGGTGAGGGCATGGTGGTGCAAGAAGCATTGTGTGGATGCCATTGTGCTCAAAATCTTCTTAGTTTCTTTGCTCTTGGGCCT
ATGAATCAGACACTAGAGTAGGCAAAGTGTGTGTGGACTAGGAAGTGGCTTTAGATGTGGGGTG