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Detailed information on CNT30727018


BLAST search results

BLAST vs Swiss-Prot:
sp|P29795|PSBP_SOLLC, E-value = 3e-74

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30372941Lupinus angustifoliusArabidopsis thaliana27.3419.2581.52184forward
CNT30631059Lupinus angustifoliusVigna unguiculata29.5754.0886.43199forward
CNT30709770Lupinus angustifoliusGlycine max27.649.5586.56186forward
CNT30164849Lupinus angustifoliusPistacia vera24.9629.5380.95168forward
CNT3088598Lupinus angustifoliusVigna radiata19.6127.7986.36132forward
CNT30236483Lupinus angustifoliusBrassica oleracea23.4817.5680.38158forward
CNT30313622Lupinus angustifoliusCamelina sativa25.8528.2982.76174forward
CNT30610134Lupinus angustifoliusGossypium raimondii13.8239.2483.8793forward
CNT30619846Lupinus angustifoliusCajanus cajan21.6926.2185.62146forward

Expression of CNT30727018

Peptides detected in this lncRNA

>peptide 1 (60 aa)
MDFLSVGVTVTTRLLVTSKLSSYLRTCPTYSTSLLRFHFAGINSLNPSPLYGKKSVFAFGF

>peptide 2 (30 aa)
MYSLPSFTVALISWCFPPSSPSAVLVNTDK*

Sequence

>CNT30727018
CCCTTATCAACCACAGTGCATATAAAATGGTTTATAAAAGCTTAATAAGGCAACTTAAAATGCATAATCACACAAAAGATTAAGGGCTATATTTAAAACT
CCATAATGTCATGGAAGTTAAGCATGTAATACTACTCCATTTACAGCCCCAAAATAATGAAACATAGGGACAAAATGAGAGGCCCCAAAACTCAAAAACA
TACATAGAACTTGGGAGTTGTTGATTTACATAGAGCTTAATATCTCCCCACTAAGTAGTAAGTTATTAAGCAACACTGAAAGAAGTTGCTGCACTCTCTA
CAAATTTCTTAGCTCCCTTGAACCATCTCTTATCTCCGGCTTGAGCCTTTAAAATGTATAGTCTCCCATCTTTTACAGTTGCACTAATAAGTTGGTGCTT
CCCTCCTTCATCTCCATCGGCTGTCCTTGTCAACACAGACAAATAGTAGTATTCTTTCCCATCGACCACGGGTGCACCATAATCCTTGATGGACTTCTTA
TCGGTTGGAGTGACTGTGACAACGAGATTGCTGGTTACATCAAAGTTATCCTCATACCTAAGAACCTGTCCAACATACTCGACCTCTTTGCTACGGTTCC
ACTTTGCGGGAATCAATAGTTTGAATCCATCCCCATTGTATGGCAAGAAGTCTGTGTTTGCCTTTGGCTTTCC