Detailed information on CNT30625375


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30672564Daucus carotaSetaria viridis34.4814.986.2580forward
CNT30617543Daucus carotaSesamum indicum79.7420.3581.62185forward
CNT30381739Daucus carotaManihot esculenta83.6226.6579.9194forward
CNT30283475Daucus carotaTriticum aestivum78.4523.2479.67182forward
CNT30394244Daucus carotaTriticum turgidum81.0324.8380.32188forward
CNT30591655Daucus carotaMusa acuminata5052.7381.9116forward
CNT30360803Daucus carotaLactuca sativa25.437.6588.1459forward

Expression of CNT30625375

Peptides detected in this lncRNA

>peptide 1 (47 aa)
CSSYYMRNSPMHSWPPLSSSPPRPLLCTSQLPSPASQSHLYSTSPYH*

>peptide 2 (75 aa)
VPHIICVILQCILGLHFLLHLLVLCFVLLSFLHQLLNLIFTQPPLIISNRNLVLHTSSLVLSRNIQNSIRINVEHN

Sequence

>CNT30625375
GTGTTCCTCATATTATATGCGTAATTCTCCAATGCATTCTTGGCCTCCACTTTCTTCTTCACCTCCTCGTCCTCTGCTTTGTACTTCTCAGCTTCCTTCA
CCAGCTTCTCAATCTCATCTTTACTCAACCTCCCCTTATCATTAGTAATCGTAATCTTGTTCTTCACACCAGCAGTCTTGTCCTCAGCCGAAACATTCAG
AATTCCATTCGCATCAATGTCGAACACAACAT