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Detailed information on CNT3094140


BLAST search results

BLAST vs Swiss-Prot:
sp|Q9LHA8|HS704_ARATH, E-value = 3e-49

BLAST vs NONCODE:
NONSTUT002386, E-value = 4e-180

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30617543Solanum tuberosumSesamum indicum20.1314.0882.03128forward
CNT30112153Solanum tuberosumFicus carica27.219.2282.66173forward

Expression of CNT3094140

Peptides detected in this lncRNA

>peptide 1 (47 aa)
MLLQSSFPLKKFCNSSCTLGILVDPPTRTISWTLSLSTLASLKHFSIG

>peptide 2 (49 aa)
MVVFLGIRTVISPPAVSSPSDKGVTSKRRKSLTFTLPSPLRMAACTAAP*

Sequence

>CNT3094140
CATTTCTCCATTCAGAATGCTCATCTATGCTCCTCCGAAATGGCCCCAAATTCTTTAAATTGTTGTTGAACCAGTATTGTTGAGCTTGAGTGAATTCAAT
AAATACACTTAACATCTCACAAGTGCCATGGAATCAATCTCCTTAAAGACTTCTTCAGCTCAAAATGGGTCCCAACAGCAGATCTAGGAGCTTGTAGCCT
CGACCCAGCAATCTTCGTCAAGAATCACCCTTGGTGATAAATCCTCTTGAATCTTTCCTTCTACGCAGAATGAGCTCCGAAGAACTGATACCACTGTGAA
GAGATCCATCTCCAAGAGGAATGGTGGTGTTCCTTGGAATCAGGACAGTCATAAGTCCTCCAGCAGTTTCGAGTCCTAGCGATAAAGGGGTGACATCCAA
AAGGCGCAAATCTTTAACTTTCACATTACCCTCTCCACTAAGAATGGCTGCTTGCACAGCAGCGCCATAAGCAACAGCTTCGTCGGGGTTGATGCTCTTG
CAAAGTTCCTTCCCGTTAAAGAAGTTCTGCAACAGCTCCTGCACCTTGGGAATTCTAGTTGATCCACCAACAAGAACGATTTCATGGACACTGTCCTTGT
CCACTCTAGCATCCCTCAAACATTTCTCAATTGGAT