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Detailed information on CNT30349047

BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)

Target	Query species	Target species	Query coverage (%)	Target coverage (%)	Identity	Alignment length (nt)	Orientation
CNT30180672	Eragrostis tef	Secale cereale	9.22	21.4	88.46	52	forward
CNT30610345	Eragrostis tef	Gossypium raimondii	17.02	37.5	85.42	96	forward

Expression of CNT30349047

Peptides detected in this lncRNA

>peptide 1 (38 aa)
SISKFQYLFNVRSGATRCMVSICNASTYCSCSTDMLSK*

>peptide 2 (40 aa)
QFQNSNICSMYGVELHAAWSAYAMLLHTVRVLQTCSRNRI*

>peptide 3 (70 aa)
INFKIPIFVQCTEWSYTLHGQHMQCFYILFVFYRHALEIGYKEQSSSIRSRVVVYRLIPWRGTPRVIRSR*

Sequence

>CNT30349047
ATCAATTTCAAAATTCCAATATTTGTTCAATGTACGGAGTGGAGCTACACGCTGCATGGTCAGCATATGCAATGCTTCTACATACTGTTCGTGTTCTACA
GACATGCTCTCGAAATAGGATATAAAGAACAGAGTTCATCTATCAGAAGCAGAGTAGTAGTGTATAGACTGATACCTTGGCGAGGAACTCCTCGGGTGAT
CCGAAGTCGGTGATGGTCTTCTTGTCGGTGGGGGTGATCATGACGGAGACGTTGCTGTTGGCGTCAAAGTTGTCCTCGTAGCGGAGCACCTGGCCGGGCG
CGGCGCGCCGGGAGACCTCGCCCTCGTCCTGCTTTTGCGCCTTGCAGACGAACAGGGCCCTCGGCACGGCGGCGCGCGGGGTGGAGGCGGCGCCGAGGCG
GGCGGACTGGTGGAGGAAGCAGGAGGTGGACGCCATGGCTCTTTCTCTCTCTCTGCTGATGCGCCTTCTCGCTCGCCGGCTGCCGCTTGAAGAGTGTGGA
TGACAGACACTGCTCGCGGGCGTGTTAGCTCGCTCTGTGTTAACGAGGGGAGGGCGGCGTGGGG