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Detailed information on CNT30564557


BLAST search results

BLAST vs Swiss-Prot:
sp|P27489|CB23_SOLLC, E-value = 6e-88

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30381107Actinidia chinensisManihot esculenta81.2553.8182.15325forward
CNT30629897Actinidia chinensisVigna unguiculata48.515.8484.02194forward
CNT30309482Actinidia chinensisCamelina sativa41.7562.5582.04167forward
CNT30652643Actinidia chinensisRosa chinensis82.2551.4980.85329forward
CNT30358309Actinidia chinensisLactuca sativa52.7521.9886.26211forward
CNT30574379Actinidia chinensisVitis vinifera7228.9484.38288forward
CNT30604338Actinidia chinensisOryza punctata59.2535.0681.86237forward
CNT30556551Actinidia chinensisPanicum hallii83.556.6182.04334forward

Expression of CNT30564557

Peptides detected in this lncRNA

>peptide 1 (34 aa)
SRHKLGGIDPSIVSYRVVKVVQELSKGNRVIGKA*

Sequence

>CNT30564557
TCCAGGCACAAACTTGGTGGCATAGACCCAAGCATTGTTAGCTACAGGGTTGTCAAGGTGGTCCAAGAGCTCAGCAAAGGTAACCGGGTCATCGGCAAGG
CCTAGTGGGTCAAAGTATTGTCCACCGGGGTAGAGGTCGTTACCCTCTCCTACCCCAGGAATGCCGTTGATGCGGTAACCCTCGACGAGGCCCATTAAGA
CGACTTGGAAGCCAAGCACGGCTAGAATACTCTGGGCATGGACCAAATTGGGGTTGCCCAAGTAGTCTAGCCCACCCTCGGAGAAGATTTGGGCTCCGGC
TTTGAACCAAACTGGCTCCTTGAAGTCCACTTTGACCCATTTCTCGAGGACTTCAGGGGTGATGCATCCCAGTGCTCCAAGCATGGCCCATCGCCCGTGG