Detailed information on CNT30309482


BLAST search results

BLAST vs Swiss-Prot:
sp|P20865|CB2_DUNSA, E-value = 6e-27

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30728364Camelina sativaCorchorus capsularis71.5427.3682.2191forward
CNT30381107Camelina sativaManihot esculenta63.6728.1583.53170forward
CNT30564557Camelina sativaActinidia chinensis62.5541.7582.04167forward
CNT30238317Camelina sativaBrassica oleracea99.6327.9192.86266forward
CNT30510187Camelina sativaSolanum lycopersicum64.7919.6185.55173forward
CNT3062573Camelina sativaArabidopsis lyrata87.2740.2495.28233forward
CNT30652643Camelina sativaRosa chinensis98.8841.3181.44264forward
CNT30213636Camelina sativaHelianthus annuus38.222.2785.29102forward
CNT30359477Camelina sativaLactuca sativa36.716.3986.7398forward
CNT30574379Camelina sativaVitis vinifera76.0320.481.28203forward
CNT3035078Camelina sativaCucumis melo73.0320.4480.51195forward

Expression of CNT30309482

Peptides detected in this lncRNA

>peptide 1 (35 aa)
GYKSLPSPTPSRPLMRKPSTKPIRMTWKPRTAKML*

>peptide 2 (32 aa)
GVQVVAFTNTIKTVDAETFNQAHKDDLEAKDG*

Sequence

>CNT30309482
GGGGTACAAGTCGTTGCCTTCACCAACACCATCAAGACCGTTGATGCGGAAACCTTCAACCAAGCCCATAAGGATGACTTGGAAGCCAAGGACGGCTAAA
ATGCTCTGAGCATGGACTAGGTTTGGGTTGCCTAAGTAGTCCAAGCCACCTTCAGAGAAGATCTGTGAACCGGCCTTGAACCAGACTGGTTCTTTGAAGT
CCACACGTACCCACTTTTGAAGAACTTCAGGGGTTATGCAACCAAAAGCTCCCAACATTGCCCATCT