Detailed information on CNT30563336


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30201936Actinidia chinensisPisum sativum56.9313.0193.91115reverse complement
CNT30284073Actinidia chinensisTriticum aestivum56.933.6591.3115reverse complement
CNT30236148Actinidia chinensisBrassica oleracea54.957.2396.4111reverse complement
CNT30257701Actinidia chinensisAvena sativa56.9316.5792.17115reverse complement
CNT30628236Actinidia chinensisDaucus carota56.9310.5896.52115reverse complement
CNT30367840Actinidia chinensisSorghum bicolor56.9325.6190.43115reverse complement
CNT30148338Actinidia chinensisBrachypodium distachyon22.7711.2295.6546reverse complement
CNT30116778Actinidia chinensisOryza nivara56.9317.4891.3115reverse complement

Expression of CNT30563336

Peptides detected in this lncRNA

>peptide 1 (65 aa)
VLGWRLKVSLMKTLYSLRKFYPLETLFNGTLALAGRDQGSNPSLSVFLDDLIFDLSFKFCKSLFFF

Sequence

>CNT30563336
TCGTGCTTGGATGGCGGCTCAAGGTCAGCCTCATGAAAACCTTATATTCCCTGAGGAAGTTCTACCCCTTGGAAACGCTCTTTAATGGAACTTTAGCTTT
AGCTGGTCGTGACCAGGGTTCGAATCCCTCTCTTTCCGTTTTCTTGGATGACTTGATATTTGATTTATCTTTCAAATTTTGCAAATCACTTTTCTTTTTT
CG