Detailed information on CNT30549087


BLAST search results

BLAST vs Swiss-Prot:
sp|P27322|HSP72_SOLLC, E-value = 3e-41

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30535611Ipomoea trilobaEucalyptus grandis70.487.685.86191forward
CNT30515000Ipomoea trilobaJuglans regia29.5212.6486.2580forward
CNT30224553Ipomoea trilobaHordeum vulgare52.7768.7581.82143forward
CNT30394524Ipomoea trilobaTriticum turgidum51.6638.0480.71140forward
CNT30440568Ipomoea trilobaAegilops tauschii33.9527.1483.792forward
CNT30613938Ipomoea trilobaArabis alpina37.2739.389.11101forward
CNT304903Ipomoea trilobaZea mays22.1412.2788.3360forward
CNT30625111Ipomoea trilobaDaucus carota71.5919.1785.57194forward
CNT30570947Ipomoea trilobaVitis vinifera21.0323.0891.2357forward
CNT30644072Ipomoea trilobaCannabis sativa45.0227.2985.25122forward
CNT30325214Ipomoea trilobaAsparagus officinalis53.8748.6784.93146forward
CNT30150813Ipomoea trilobaBrachypodium distachyon30.6314.5984.3483forward
CNT30112072Ipomoea trilobaFicus carica45.7655.3687.1124forward

Expression of CNT30549087

Peptides detected in this lncRNA

>peptide 1 (36 aa)
CAVDERVLFALSQAVLNLLRDLGLPVISFLFFLLNS*

>peptide 2 (50 aa)
MINHPVIKIFTSKMGVSSSSLHFKDTFLNGDYNHGLISRTRNDLKWPQLDI

Sequence

>CNT30549087
CTGCGCGGTTGATGAAAGAGTCCTCTTCGCCCTTTCACAAGCTGTCCTCAACCTCCTCAGAGACCTAGGGTTACCAGTGATATCTTTCTTGTTCTTTCTT
TTGAATTCCTGAACAAAATGATTAACCATCCTGTTATCAAAATCTTCACCTCCAAGATGGGTGTCTCCAGCAGTAGCCTTCACTTCAAAGATACCTTCCT
CAATGGTGACTACAATCATGGGCTTATCTCCAGGACCAGGAATGACCTTAAATGGCCACAACTTGATATCA