Detailed information on CNT30224553


BLAST search results

BLAST vs Swiss-Prot:
sp|O65719|HSP7C_ARATH, E-value = 5e-36

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30549087Hordeum vulgareIpomoea triloba68.7552.7781.82143forward
CNT30515000Hordeum vulgareJuglans regia22.67.4293.6247forward
CNT30394524Hordeum vulgareTriticum turgidum45.6725.8288.4295forward
CNT30510956Hordeum vulgareSolanum lycopersicum28.3722.188.1459forward
CNT30613938Hordeum vulgareArabis alpina33.1726.8592.7569forward
CNT30625111Hordeum vulgareDaucus carota74.5215.3285.16155forward
CNT30644072Hordeum vulgareCannabis sativa39.918.5790.3683forward
CNT30325214Hordeum vulgareAsparagus officinalis71.1549.3386.49148forward
CNT30150813Hordeum vulgareBrachypodium distachyon54.3319.8692.92113forward
CNT30112072Hordeum vulgareFicus carica36.5433.9390.7976forward

Expression of CNT30224553

Peptides detected in this lncRNA

>peptide 1 (32 aa)
ERVLFARSQDVLSLRRALGLPLMSFLFFLLNS*

>peptide 2 (68 aa)
GESPLCPLTGCPQPPKSSRVATDVLLVLPLELLNKVVDHPVVEVLTTKMSTTSKVKDEDILLTNTRSLL

Sequence

>CNT30224553
AGGAGAGAGTCCTCTTTGCCCGCTCACAGGATGTCCTCAGCCTCCGAAGAGCTCTCGGGTTGCCACTGATGTCCTTCTTGTTCTTCCTCTTGAACTCCTG
AACAAAGTGGTTGACCATCCTGTTGTCGAAGTCCTCACCACCAAGATGAGTACCACCTCCAAGGTCAAAGATGAGGACATTCTTCTCACCAACACTAGAA
GCCTTCTT