Detailed information on CNT30440568


BLAST search results

BLAST vs Swiss-Prot:
sp|P24629|HSP71_SOLLC, E-value = 1e-42

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30549087Aegilops tauschiiIpomoea triloba27.1433.9583.792forward
CNT30168984Aegilops tauschiiPistacia vera35.9938.1281.15122forward
CNT30223130Aegilops tauschiiHordeum vulgare28.0237.791.5895forward
CNT3061823Aegilops tauschiiArabidopsis lyrata25.9612.0782.9588forward
CNT30325214Aegilops tauschiiAsparagus officinalis34.2238.6785.34116forward
CNT30112072Aegilops tauschiiFicus carica19.1729.0290.7765forward

Expression of CNT30440568

Peptides detected in this lncRNA

>peptide 1 (41 aa)
LVHLGDDGLKLAEQVVVPGPCPLTLKHLDEHTRLVVGVGPC*

>peptide 2 (38 aa)
PWYILAMMGSNLPSRLLSLVLVLSPSNTWMSTPGWLSE*

>peptide 3 (46 aa)
MVVWAVEERVLFALSQEVLSLLKDLGFPLISFLCFLLNSWTKWFTIR

Sequence

>CNT30440568
CCCTGGTACATCTTGGCGATGATGGGCTCAAACTTGCCGAGCAGGTTGTTGTCCCTGGTCCTTGTCCTCTCACCCTCAAACACCTGGATGAGCACACCAG
GCTGGTTGTCGGAGTAGGTCCATGTTGAGCTCCTCAAACCTGGCCCTGGTGATGGTGGAATAGAAATCAACTCCCTCAAAGAGTGAATCGATCTCAATGG
TGGTTTGGGCAGTGGAAGAAAGGGTCCTCTTCGCCCTCTCACAAGAAGTCCTGAGCCTTCTCAAAGACCTGGGGTTTCCACTGATATCCTTCTTGTGCTT
CCTCTTGAACTCTTGGACAAAGTGGTTCACCATACGGTT