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Detailed information on CNT30628736


BLAST search results

BLAST vs Swiss-Prot:
sp|P09756|CB23_SOYBN, E-value = 7e-156

BLAST vs NONCODE:
NONMTRT001605, E-value = 3e-101

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30514316Vigna unguiculataJuglans regia61.7657.284.46457forward
CNT30269327Vigna unguiculataChenopodium quinoa67.1656.885.71497forward
CNT30380511Vigna unguiculataManihot esculenta47.575083.52352forward
CNT30404250Vigna unguiculataBeta vulgaris62.1644.8383.04460forward
CNT30504491Vigna unguiculataNicotiana attenuata77.360.3484.97572forward
CNT3046618Vigna unguiculataPrunus dulcis76.8968.0684.36569forward
CNT30633568Vigna unguiculataCapsicum annuum77.361.5184.27572forward
CNT3091768Vigna unguiculataSolanum tuberosum79.1956.6783.96586forward
CNT30562273Vigna unguiculataActinidia chinensis73.6554.9983.3545forward
CNT30508800Vigna unguiculataSolanum lycopersicum76.8960.9983.83569forward
CNT30173249Vigna unguiculataTrifolium pratense65.2750.9583.85483forward
CNT30146374Vigna unguiculataMedicago truncatula78.3861.786.03580forward
CNT30598305Vigna unguiculataFraxinus excelsior52.8457.2582.86391forward
CNT30609649Vigna unguiculataGossypium raimondii71.3569.7584.66528forward
CNT30623258Vigna unguiculataDaucus carota79.1959.4384.98586forward
CNT30621493Vigna unguiculataCajanus cajan79.5943.8990.32589forward
CNT30359492Vigna unguiculataLactuca sativa72.4362.6984.14536forward
CNT30153357Vigna unguiculataPrunus persica77.332.3984.79572forward
CNT30408205Vigna unguiculataPapaver somniferum79.5957.880.14589forward
CNT30705057Vigna unguiculataPrunus avium76.0868.0884.55563forward
CNT30337332Vigna unguiculataCynara cardunculus78.3843.9184.31580forward

Expression of CNT30628736

Peptides detected in this lncRNA

>peptide 1 (29 aa)
MAHLEWMTSSSRFLAKVSGSAESPAVSQP*

>peptide 2 (31 aa)
MGRSFHLGKLGQSPHREAHRQYGNPQRHPLR*

>peptide 3 (35 aa)
MENMANLPFFSSFTFNSAKASGSSARPNGSKLPPG*

Sequence

>CNT30628736
TTTTGCATCCAATATATATTTCATTGCATAAAAACTTGAAAGTCACACTCCAGTGGTAGTTTCTCACTGTTTTAATTTAATTTAATTTATTTTTTCTCAC
TTTCCAGGGACAAAGTTTGTAGCATATGCCCAAGCATTGTTGTTGACTGGGTTTTCCAGGGGTCCCTTTCCGGTAACAATCGCTTGAACAAAGAAACCGA
ACATGGAGAACATGGCTAATCTACCGTTTTTCAGTTCTTTCACCTTCAACTCAGCGAAAGCCTCTGGGTCATCAGCAAGGCCCAATGGGTCGAAGCTTCC
ACCTGGGTAAATTGGGTCAGTCACCTCACCGAGAGGCCCACCGGCAATACGGTAACCCTCAACGGCACCCATTAAGATAACTTGAGAGGCCCAGATAGCA
AGGATGCTCTGTGCGTGGACCAGGTTTGGATTGCCCAAGTAGTCAAGCCCACCCTCACTGAATATCTGAGAGCCAGCCTTAAACCACACAGCCTCGCCGA
ACTTGACACCATTACGGGACAAGAGTTCGGGGAAAACACAGCCCAAGGCTCCCAACATGGCCCATCTGGAGTGGATGACTTCAAGTTCACGGTTTTTGGC
AAAAGTCTCTGGGTCAGCGGAGAGCCCAGCAGTATCCCAGCCATAGTCACCTGGGAATTCACCGGTGAGGTACGATGGTGCCTCACCAGAGAATGGGCCC
AAGTACTTAACACGGTCCGGGCCGTACCATGGGCTTCCAG