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Detailed information on CNT30564070


BLAST search results

BLAST vs Swiss-Prot:
sp|P27495|CB24_TOBAC, E-value = 2e-135

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30514316Actinidia chinensisJuglans regia49.3652.8282.7422forward
CNT30728214Actinidia chinensisCorchorus capsularis56.7357.683.92485forward
CNT30709101Actinidia chinensisGlycine max53.4553.785.34457forward
CNT30609983Actinidia chinensisGossypium raimondii63.8667.8384.62546forward
CNT30217700Actinidia chinensisKalanchoe fedtschenkoi46.7850.782.25400forward
CNT30176340Actinidia chinensisVigna angularis40.4737.2883.24346forward

Expression of CNT30564070

Peptides detected in this lncRNA

>peptide 1 (34 aa)
MERVFRRKMVKRGTLLRQPWYRRESSWYLESLERS

>peptide 2 (35 aa)
MFFFFNFPSLSGDEVGSISPSIVVHGLSKSLWVFC*

>peptide 3 (31 aa)
MGRSFHQGTMGQRPHLAAHQQYGSLQRLPSR*

Sequence

>CNT30564070
ACTCAGTTAAATGAAAAGTTGACATTTTCTGCATTACTACAAACCAATTTACAGCACACACTTTCCAAATTCAGAACCCTCTAAATGGACTCTCACAGCA
CAAACTTTCATGTTTTTCTTTTTTAATTTTCCCTCACTTTCCGGGGACGAAGTTGGTAGCATAAGCCCAAGCATTGTTGTTCACGGGCTCAGCAAAAGCC
TCTGGGTCTTCTGCTAGGCCCAATGGGTCGAAGCTTCCACCAGGGTACAATGGGTCAACGACCTCACCTAGCGGCCCACCAGCAATACGGTAGCCTTCAA
CGGCTCCCATCAAGATAACTTGGCAAGCCCAGATGGCAAGAATGCTTTGGGCGTGGACCAAGTTAGGGTTGCCCAAGTAGTCAAGCCCACCCTCACTGAA
GATTTGGGAACCGGCCTTGAACCAGACCGCCTCACCAAACTTGACACCGTTTCGGGCCAAAAGTTCGGGGAAGACACATCCAAGGGCTCCAAGCATGGCC
CATCTGCAGTGAATCACCTCCAACTCACGGTTTTTTGCGAAGGTTTCAGGGTCAGCTGAAAGCCCAGCAGTATCCCAGCCGTAGTCACCAGGGAATTCTC
CAGTCAGGTAAGATGGGGGTTCACCAGAGAGTGGGCCCAAGTATAGAACTCGGTCTTTCCCGTACCACGGGCTACCAGATGATGCAGACTTGGTAGACTT
CCTTGCGTTGACTTGGAAGACTCTTCGTGCGCCGACGTGCTCCAAGGGGGATGGAGAGAGTTTTCCGGCGAAAGATGGTGAAGAGAGGGACATTGTTGAG
GCAGCCATGGTATAGAAGAGAAAGCTCTTGGTATTTGGAAAGTTTGGAAAGAAGT