CANTATAdb - search

Detailed information on CNT30153531

BLAST search results

BLAST vs Swiss-Prot:
sp|P27495|CB24_TOBAC, E-value = 5e-150

BLAST vs NONCODE:
NONMTRT001605, E-value = 7e-34

Results of reciprocal BLAST search (potential orthologs)

Target	Query species	Target species	Query coverage (%)	Target coverage (%)	Identity	Alignment length (nt)	Orientation
CNT30514316	Prunus persica	Juglans regia	70.56	58.2	83.23	465	forward
CNT30234656	Prunus persica	Brassica oleracea	60.24	72.45	81.86	397	forward

Expression of CNT30153531

Peptides detected in this lncRNA

>peptide 1 (39 aa)
LSCNNGLHKETKHGKHGESSILQLLHLQLSESLWILCKA*

>peptide 2 (29 aa)
MAHLEWITSSSRFLAKVSGSAESPAVSQP*

>peptide 3 (62 aa)
FPVTMACTKKPNMENMASLPFFSSFTFSSAKASGSSARPNGSKLPPGYNGSVISPRGPPATL*

>peptide 4 (57 aa)
MDNFKLTVLGKGLRVSREPSSVPTVIAGEFSSEVRRGLARERAQVFDTVRAVPRAAG*

Sequence

>CNT30153531
CTTTCCTGTAACAATGGCCTGCACAAAGAAACCAAACATGGAAAACATGGCGAGTCTTCCATTCTTCAGCTCCTTCACCTTCAGCTCAGCGAAAGCCTCT
GGATCCTCTGCAAGGCCTAATGGGTCAAAGCTCCCACCTGGATATAATGGGTCAGTGATCTCTCCGAGAGGCCCACCTGCAACTCTGTAACCTTCCACTG
CACCCATCAAGATAACTTGTGTGGCCCAAATTGCTAAAATGCTTTGGGCATGGACTAAGCTTGGGTTTCCCAAGTAGTCTAGCCCACCCTCACTGAATAT
CTGGGCGCCAGCCTTGAACCATACAGCCTCACCGAACTTGACCCCGTTACGGGACAAGAGTTCAGGGAAAACGCAGCCCAGAGCACCAAGCATGGCCCAT
CTTGAATGGATAACTTCAAGCTCACGGTTCTTGGCAAAGGTCTCAGGGTCAGCCGAGAGCCCAGCAGTGTCCCAACCGTAATCGCCGGGGAATTCTCCAG
TGAGGTAAGAAGGGGCCTCGCCAGAGAACGGGCCCAAGTATTTGACACGGTCAGGGCCGTACCACGGGCTGCCGGATGAAACATTTTTGGACCTGGATGC
GGTTTTGCGCATGGTAACTCGGCCCTCACCAACAATGTTAGAAACAGAGGAACCGAGCT