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Detailed information on CNT30438126


BLAST search results

BLAST vs Swiss-Prot:
sp|P04373|COX2_ORYSJ, E-value = 9e-83

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30618782Aegilops tauschiiSesamum indicum48.8114.9592.13267forward
CNT30267807Aegilops tauschiiChenopodium quinoa30.98.4890.53169reverse complement
CNT30193656Aegilops tauschiiSecale cereale10055.3697.99547forward
CNT30592667Aegilops tauschiiMusa acuminata72.9437.7190.73399forward
CNT30228140Aegilops tauschiiAnanas comosus25.9632.7980.28142forward
CNT30596067Aegilops tauschiiOryza meridionalis15.928.4394.2587reverse complement
CNT30358835Aegilops tauschiiLactuca sativa57.5914.8689.84315forward
CNT30574573Aegilops tauschiiVitis vinifera76.610.4390.93419forward
CNT30104690Aegilops tauschiiOryza rufipogon100.5544.2896.55550forward

Expression of CNT30438126

Peptides detected in this lncRNA

>peptide 1 (44 aa)
MHSTRKRALELFERASKAFMELPPSLTRELHFRFSFIDLVGLED*

Sequence

>CNT30438126
TCGTGTAGTAAGGCCTCACCCTACTTCAATAAGGGCTTATGCACTCCACTCGTAAACGAGCGTTAGAGCTTTTTGAGCGAGCGAGCAAAGCCTTCATGGA
GCTTCCCCCTTCCCTCACCCGAGAATTGCATTTCCGCTTCAGCTTCATCGATTTAGTTGGTTTGGAGGATTAATTGATTGGATACCCAATCCGCATAATC
TTTCAAAGTCACTGCTTCTACGACGATAGGCGTAAAGCCATGATTAGTTCCACGAATCTCACTGCACTAACCATAGTAAACTCCTTCTCGTTGTACCAAG
ATGGAGGTAAGATTTGAACGACCAGGTACAACATCAAATTTGACACCTGAGGAAGGTACAACCCAACTATGAGGTACATCAGCGGGTGTTACAATCATAC
GTAGATGAGTTTTGGCTGGTACAACCACTCTATTGTCAACTTCTAATAAACGTGATTGACCCAATTCTGGATCATCTTCTGGAATCGTATAACTGTCAAA
AGTGAGTGACTGTTCATCGGAACTGTTATAGTCTGAATACTCATAAG