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Detailed information on CNT30618782


BLAST search results

BLAST vs Swiss-Prot:
sp|P98012|COX2_BETVU, E-value = 7e-98

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30631488Sesamum indicumVigna unguiculata11.247.5187200forward
CNT30193656Sesamum indicumSecale cereale14.9527.0292.51267forward
CNT30592667Sesamum indicumMusa acuminata15.0125.3391.04268forward
CNT30438126Sesamum indicumAegilops tauschii14.9548.8192.13267forward
CNT30358448Sesamum indicumLactuca sativa2.824.889650forward
CNT30370833Sesamum indicumOryza glumipatula6.4926.5491.38116forward
CNT30104690Sesamum indicumOryza rufipogon14.9521.592.51267forward

Expression of CNT30618782

Peptides detected in this lncRNA

>peptide 1 (45 aa)
MRLLLRVKHISHPLSPYLLSLPIELLSLSYRQFINDSEFRDKERE*

>peptide 2 (39 aa)
MAGSTTTSSIEYKIANDGIAMNIRMILGDMVHGISIVVP*

Sequence

>CNT30618782
GAACCTCCTTCTCGTTGTACCGAAATAGAGGTCTGATTTAAACGACTAGGTACAACATCACATTTGACACCTAAGGAAGGTACAGCCCAACTATGAGGTA
CATCAGCAGGTGTTACAATAATACGCAAATGAGTTTTTTCTGGTACAACCACTCTATTGTCCACTTCTAATAAACGTGATTGACCCAATTCTGGATCATC
TTCTGGAATCGTATAACTGTCTAAAGTGAGTGACTGTTCATCTCCACTGTTATAGTCTGAATACTCATAAGTCCAATACCATTGATGTCCAATAGCTTTG
ATAGTAATGGCTGGATCTACTACTACCTCGTCCATTGAATATAAGATAGCAAATGATGGTATAGCAATGAACATCAGGATGATACTAGGAGATATGGTCC
ACGGAATCTCGATAGTAGTTCCATGAGCAATCCTTTGCAGGATTGGATTTTTTTTATAGTGGAAGTGCCATAAAGCGCGAACCAAGATCCATGATACGAA
AACAAAAATCAGAATAAAAAAGAAAAAGATATTGTGATGTAAGTCTAAATTCCTTGCATCATAGGTGTTGCTGCGTCTTGAGATCCTAATTGCCATGGTT
CTGCTGCATCACAAGGAGCAATTGTGAGGAATAGACATTCTAGAACAATCATCTTCTTTGGTTCATTCTTTGACTGCTCTGCTCCCCCAAACAAAAAAGA
GAGACTTGCTCTCCCAATTCAGGAAGACGGGAATCGCCTTGGTCCAACCAAGAAAGGCATGGGAGTCTTTGAGCATAACATTCTTCTTCTTCTCTTACGA
TATTTCTAGTCTGATGAACAGATCGTTCCTAAAAGCAGTCGTGTGATCAACTATACGATACCACCATCTGCAGTCCATTTGCATTCTCTTCCCTGCCCTT
GGCTTGGCTCGAATTGACAGGAATTGGCTGAGCCAGGATCAAACTCTTCTTTTGACTTTCTCAAAGACCAAATCAAACGTATTACTGAAACAGAGGTGTA
GCCAGCCGGGCTAGCCCCGTTTGCTTATCATGCTAAGGCTCATATCCCACCTTTTGGTGACCGTTGACCTACTTCTTATAGCTAGTTCCATAGCTAGACA
GCTCCTTTAGTACCAGAGTCTTACTTCCTACGTTTCCTTACCAAGTCGAGGTACCGTACCCTCTCCCTACAAGCGTCTTCTTCACGTTCCTCTCCGGTTC
TAAAAAAGAAAGAGAATGAGACTGCTGCTACGGGTAAAGCATATTTCCCATCCTCTCTCTCCCTATCTGCTCTCGCTGCCAATTGAATTACTCTCCCTAT
CATATAGGCAATTCATAAACGATAGCGAATTCAGAGACAAAGAGAGGGAATGAACCTAAACGAAAGACGGAAAGAGTAAGTAACTTCGTACCTCTCCCTG
CTCTAGGTGCCCAAAAGCATAACAAGGCCGAGTTCTTAGTTCGGAGTTGAATTCATGGACCGGAATGTAACAGCTAAAGAAGAAAACGTTAGCTGTGTCT
TCTATTCCCAAGGGAGATAGATAGAGGCGAAAACCCTATAATGCCCTTTACTTTACTTAGTAGTTAGTATTCAGTATCGGTATCAGTATCTCTTTCTCTT
TCTGTAAGCTTTTGAATTGCAGTGAGCAAAACAAATCGAATTTCAAGTCATTCTGTTGTAAGCTTTGGAATCGCAAATCAAGTTCTTTGGCAAGCGCTAC
GAGCAGTACATCCCTATCCCTAAACTCTTCTTTCTCTCCAATATTGGTCACATCACTGATCTTGAAGAGAGGGAAGAGGTTTGAGG