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Detailed information on CNT30592667


BLAST search results

BLAST vs Swiss-Prot:
sp|P04373|COX2_ORYSJ, E-value = 2e-102

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30618782Musa acuminataSesamum indicum25.3315.0191.04268forward
CNT30631488Musa acuminataVigna unguiculata11.0627.7987.18117forward
CNT30193656Musa acuminataSecale cereale44.7147.8789.85473forward
CNT30438126Musa acuminataAegilops tauschii37.7172.9490.73399forward
CNT30370833Musa acuminataOryza glumipatula19.4747.1491.75206forward
CNT30574573Musa acuminataVitis vinifera38.6610.1893.15409forward
CNT30104690Musa acuminataOryza rufipogon44.7138.0889.43473forward

Expression of CNT30592667

Peptides detected in this lncRNA

>peptide 1 (32 aa)
MIMNEESFPFPFFDCSAPPKRERRQLETWRWVF

>peptide 2 (34 aa)
RAISRPFAIAIRAARLYTAWLRYRSYVVVGLKRS*

>peptide 3 (35 aa)
MHSTERIERAKPSLSFPLPSPYYCFRFHGLVGLED*

Sequence

>CNT30592667
TAGGGCTATAAGTAGGCCGTTTGCTATTGCTATAAGGGCTGCTCGCCTTTATACGGCTTGGCTTCGCTATCGCTCCTATGTAGTGGTCGGCCTTAAAAGG
AGTTAGCCTCTAATGCCTATATTAGAATAGTGCGTTAAGCTTCGCCAGAAGCACAGAAGACTAGGGGAAGCTGTTCGTATACAAGACTCGTTCCTGACTT
ACGAGCTCGTGTAGTTAGGCCTCTACTACTTCAATAAAAGAAATAGGGCTTATGCACTCCACCGAGCGAATTGAGCGAGCGAAGCCTTCCTTGAGCTTCC
CACTTCCCTCACCCTACTATTGCTTCCGCTTCCACGGGTTAGTTGGTTTGGAGGATTAATTGATTGAATACCCGAGAACCATAATCTTTCAAAGAAACTG
CTTCTACGACGATGGATAGGGGTAAGGCATGATTAGTTCCACGAATCTCACTGCACTGACCATAGTAAACTCCTTCTCGTTGTATAAAAATAGAGGTATT
ATTTGAACGACCTGGTACAGCATCACATTTGACACCTGAAGAAGGTACAGCCCAACTATGAGGTACATCAGCAGGTGTTACAATCATACGTAGATTTGTT
TTGGCTGGTACAACCACTCTATTGTCAACTTCTAATAAACGTGATTGACCCAATTCTAGATCATCTTCTGGAATCATATAACTGTCAAAAGTGAGTGACT
CTTCATCTCCACTGTTATAGTCCGAATACTCATAAGTAGTTCCATGAACAATCCTTTGCGGAACAGGATTAGTTTGCTCGTGGAAATGCCATAAGGCGCG
AACCAAGATCCGTGATACGAAAACCAAAATCAGAATAAGGAAGAAAAAGATATCATGATGTAAGTAAATGATTCCTTGCATAATAGGTGTTGCTGCATTT
TGAGATCCTAATTGCCAGGGTTCCGCAGCATCACAAGGAGCAATTGTGAGGAATCGCCATGATAATGAATGAAGAATCATTTCCTTTTCCATTCTTTGAC
TGCTCTGCTCCCCCGAAAAGAGAAAGGAGACAACTAGAGACTTGGCGTTGGGTTTTCC