Detailed information on CNT30574573


BLAST search results

BLAST vs Swiss-Prot:
sp|P80498|COX2_SOLTU, E-value = 1e-09

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30631488Vitis viniferaVigna unguiculata8.6182.1984.68346forward
CNT30503608Vitis viniferaNicotiana attenuata4.9825.3598.5200forward
CNT30193656Vitis viniferaSecale cereale21.5887.7586.74867forward
CNT30290429Vitis viniferaTriticum aestivum1.6931.0597.0668reverse complement
CNT30592667Vitis viniferaMusa acuminata10.1838.6693.15409forward
CNT30554259Vitis viniferaOryza glaberrima6.6233.592.86266forward
CNT30438126Vitis viniferaAegilops tauschii10.4376.690.93419forward
CNT30358448Vitis viniferaLactuca sativa4.1182.0993.33165forward
CNT30370833Vitis viniferaOryza glumipatula4.5341.6593.41182forward
CNT3059207Vitis viniferaAmborella trichopoda8.4937.9385.92341forward
CNT30104690Vitis viniferaOryza rufipogon12.339.7793.93494forward

Expression of CNT30574573

Peptides detected in this lncRNA

>peptide 1 (44 aa)
MSKGNRRPGKVYWLQGTLFHPALPTLPYVFEGEAGTEKDLVPHT*

>peptide 2 (39 aa)
MAGSTTTSSIEYKRTNDGIAMNIGMILGNMVRRISIVVP*

>peptide 3 (38 aa)
MNRSILCDLPPFTTSLASRCERLLGGGVEALVPFGQVT*

>peptide 4 (34 aa)
MVQIVGARSQVIPRWIERGGEVRASTRKPFGHSH*

>peptide 5 (34 aa)
MTHEKGFHRLNGSIWVRPLTAEPEQQRERKALCP*

>peptide 6 (33 aa)
MYSRGRLEPKKTWFHTHETRRRYGATSSPRKAN*

>peptide 7 (31 aa)
MIQNFFNLKKQLIYDHPSHSSESANRRTHIYI

>peptide 8 (30 aa)
MGRLQFRIHYYSNFFLMSKRSLSFFWAMTF*

>peptide 9 (45 aa)
MTCIVVGLKTSIPTIPECLLSSARSFARSKQDEVALLRRQGSFRT*

>peptide 10 (49 aa)
MRPRIPTFQRALCQQVPPPTLAEKLSHPSFFFSLQQVSCEALQTCSGVN*

>peptide 11 (52 aa)
MLGAFRGIGLTTSTPRFWHAIVIKVSRRREWEITGKPDASRTIFHFKAFRCT*

>peptide 12 (68 aa)
MVPIDSLLQRRYRTLQAEHLFLVYRSTPRRGMCTSSNNKNGTIGSYAGSISGYRSNHLNSPFLACYSY*

>peptide 13 (69 aa)
MGVFGHCLGAWAELSKDWLPTDRRPLRSTSTLTAHFLYLCLPAACSSYESEIEQWGGYNSESTITVISF*

Sequence

>CNT30574573
TCTGTATTCAGCATTTTATGAGCTTTACAGGCCCGTTGAAGTCCCCGAAAAAAGGGGAAAAATGGGGCTATAAGTAGGCCGTTTGCTATTGCTATAAGGG
CTGCTCGCCTTTATACGGCTTGGCTTCGCTATCGCTCATGACTTGTATTGTGGTCGGCCTAAAGACTAGTATTCCTACCATACCAGAATGCCTATTATCT
AGTGCTAGAAGCTTCGCCAGAAGCAAGCAAGACGAGGTCGCTCTGCTTCGTAGACAAGGCTCGTTCCGTACTTGACTTACGAGCTCGTGTAGTACTCGCC
CCTCTCTCTAAAGGGGCTTATGCACTCCACTCGCTGTCTACTAAACGAGCGTTAGAGCGAGCGAGCGAAGCCTTCAATTTAGTGGCTTCCCCCCTTTTCC
CTCACCCTACTCTTTCATTTCCGCTTAAGCTTCCCCGGTTTGGTTGGTTTGGGGGATTAATTGATTGGATACCCGAGAACCATAATCTTTCCTAGGAACA
GCTTCTACGACGATAGATAGGGAGGCATGATTAGTTCCACGAATCTCACTGCACTGACCATAGTAAACTCCTTCTCGTTGTACCGAAATAGAGGTCTGAT
TTGAACGACCAGGTACAGCATCACATTTGACACCTGAGGAAGGTACAGCCCAACTATGAGGTACATCAGCAGGTGTTACAATAATACGTAGATTAGTTTT
GGCTGGTACAACCACTCTATTGTCCACTTCTAATAAACGTGATTGACCCAATTCTGGATCATCTTCTGGAATCGTATAACTGTCAAAAGTGAGTGACTCT
TCATCGGAACTGTTATAGTCCGAATACTCATAAGGTTGGGTCGACGCCCGCCTCCCCCCAAACTGTACTTGCAAGTTTCCCCGCAAAAAGCTCTCCACGC
CTACTCTTAGAAAGAGCACTCTTTTTTCTTTAGTTAGGGTAGTTCTCCCGACCGTAAGACCCTTTATGAGTAAGGGGAATCGAAGGCCGGGGAAAGTTTA
TTGGCTACAGGGGACCCTTTTTCACCCAGCCCTACCTACCCTACCCTATGTATTCGAGGGGGAGGCTGGAACCGAAAAAGACCTGGTTCCACACACATGA
GACACGCAGAAGGTATGGGGCGACCAGTTCACCACGGAAAGCAAATTAGATCCTATCCTATAGTTGTCTTCTTTGTTCGATAAATGCGCAGTGGAAAGGG
ATGCTAGCCGGCTCGGCGAAGTTGTAGGCCCCAATAGATCAGATTCAGAGTGATTCCTCACCTATCCTGTCAGGGGCCCAGTTGAACGCTCGAGTATAGA
TTCCCTATGCTCATGTGAACGGCCGGGGCCGGCCGGCCCGTAGATCTAAAAGGATCCATCCATAGGCCTGACCGGATATCGTTTGTCCACGAACAAAACA
AAAAAAAAACAAAGTAGGTTTTTAGTAGTAGTTCATGAGACCTCGAATTCCCACGTTCCAGCGTGCATTATGCCAACAGGTCCCACCCCCAACTCTAGCT
GAGAAGTTGAGTCACCCTTCTTTTTTTTTTTCGTTGCAGCAAGTAAGTTGCGAGGCGCTCCAGACCTGTTCGGGCGTGAACTGAGCTTCCAACAATAAGA
TCCTACTACTGCTCATTCCAGCGGACGGGACGCTTTCCCAGTTTCACGTACTTTTATTTTTTATCACCAGAATGCATGTGAAAATCAACTAACCGGCCGG
TGGGTGATTCTGGTTCTATCTCCGCTTGATCCCAGTTTCCATTCCCCTTTCTTCAGGAGGCGAGGTTCGGGTCGGAGGGACGGGGCGAAGCGCTCCGTTG
TTCACCGCTAATTTATAGTACAAGTCTATCAGAAGTGCTTTCGGTTTTGTTTTAGTATGGTCCAGATCGTCGGAGCCCGGAGCCAGGTGATACCGCGATG
GATTGAGCGGGGCGGGGAGGTGCGAGCTTCCACTCGAAAGCCTTTCGGTCACTCGCATTAGGGCATTCCGATCGCTTCTCATACTACTCCCTCGCCCCTG
ACTGGAAAGGAGACATACGACATAGTTAGTCGGCCCTATTCATTCCATTCCTGAAAGGAGCAAGCTGAAAAAGCCCTTTCCCCTTTCTCTAATAATAAGG
GCGTTAAGCAACCGGCTCATCTTTCTTTTTTCAGAAAAAGAATAGAATAAAGAAAGATAGAGTCTATATCCTGTATCGATCATAGGATCACTCTATGAAT
AGGTCGATTCTCTGTGACCTCCCACCGTTCACGACATCCCTTGCTTCTCGCTGCGAACGGCTCCTCGGTGGAGGAGTAGAAGCGCTGGTCCCCTTCGGTC
AAGTTACTTAACTGCTGTTACCTACCGTAGGACCTCCGTCCCCGAAGCGAAGAAAGAGGAGCAGGAACAACAGGTTGTCCTCTCCCGGCCCAGTAGTTCC
GCAACTACTACCGTGGTTGTTGCCAACGGGGATCCCCCATTCCGAAAGGTTACTGGGCCGGCCGTTAGGTCCAAAGTTGTATGCCACTGCTATGGTGCCG
ATAGATTCACTACTTCAGCGCCGTTATCGGACATTGCAGGCTGAGCATCTATTTCTCGTATATCGCTCCACACCGAGAAGAGGGATGTGTACCTCCAGCA
ACAACAAGAATGGAACCATAGGCTCCTATGCTGGGAGCATTTCGGGGTATAGGTCTAACCACCTCAACTCCCCGTTTCTGGCATGCTATAGTTATTAAAG
TCTCTCGACGACGGGAATGGGAGATTACCGGTAAGCCAGATGCTTCGCGAACCATATTCCACTTTAAGGCATTTCGTTGCACTTAAATCACCCTCGTGAA
GAGGCGCACTCCGATACCATTGATGTCCAATAGCTTTGATAGTAATGGCAGGATCTACTACTACCTCGTCCATTGAGTATAAGAGAACAAATGATGGTAT
AGCAATGAACATCGGGATGATACTAGGAAATATGGTCCGAAGAATCTCGATAGTAGTTCCATGAACAATTCTTTGCGGGATTGGATTTTTTTTATAGTGG
AAATGCCATAAAGCGCGAACCAAGATCCGTGATACGAAAACCAAAATGAGAATGAGGAAGAAAAAGATATCGTGATGTAAGTCCATTACTCCTTGCATTA
TAGGTGTTGCTGCGTCTTGAGATCCTAATTGCCATGGTTCCGCTGCATCACAAGGAGCAATTGTGAGGAATAGCCATTCTAGAACAATCATTTGGTTTGG
TTCATTCTTTGACTGCTCTGCTCCCCCCCAAAAAAAGAGAGACTTGTCGGAAATAGCCGGTTGGGTTGGTCCGACCAAGAAAGGCATGGGAGTCTTTGGG
CATTGCTTGGGCGCTTGGGCCGAGTTAAGTAAAGACTGGCTACCTACTGATCGTAGACCACTAAGATCTACGAGCACCCTCACTGCACACTTTTTATATC
TCTGTCTCCCGGCTGCATGCTCTAGTTATGAATCGGAGATAGAACAATGGGGAGGTTACAATTCCGAATCCACTATTACAGTAATTTCTTTTTGATGTCG
AAACGGTCTTTATCTTTTTTTTGGGCAATGACTTTCTAATATATTGGGCCTATCCCCTTCCTTATTTATATACATTCTTTATATACATTCTTTTTGTACT
AGCTTATCCGGTGCAGTTTATGACACATGAGAAAGGATTCCATCGCCTAAACGGCTCTATTTGGGTACGTCCTTTAACGGCCGAGCCCGAACAGCAACGG
GAGAGGAAGGCTCTATGTCCATGAGGTCTCGAGCCGCTTTTTAATCGCCCCTTTATCCGGTCTTGCGAACTCCTTGCTTTTTTGAAAGCATATCTATAAA
ACATTCCGATTCCAGAACTAGGCTGGGTCAAATACTATACTAAACGTTCGGCTAGGAATGAAGAAGCCGTAAAGCCCCTCGACACCCATAGAGGGAGATT
TTAGCATAAAGAACGATATTGATGATCCAAAACTTTTTTAATTTAAAGAAGCAGCTGATCTACGACCACCCTTCTCATTCTTCAGAGTCCGCTAATCGGA
GAACTCATATATATATT