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Detailed information on CNT3042659


BLAST search results

BLAST vs Swiss-Prot:
sp|Q9LT82|MPC_ARATH, E-value = 4e-14

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30671879Prunus dulcisSetaria viridis42.1829.8581.82143forward
CNT30520706Prunus dulcisSetaria italica42.1823.3781.82143forward
CNT30616950Prunus dulcisSesamum indicum28.9123.3386.7398forward
CNT30562498Prunus dulcisActinidia chinensis20.065.1188.2468forward
CNT3013060Prunus dulcisZea mays29.7931.7682.18101forward
CNT30606636Prunus dulcisGossypium raimondii33.9227.3882.61115forward
CNT30128674Prunus dulcisCorymbia citriodora23.633.7687.580forward
CNT30410641Prunus dulcisPapaver somniferum29.219.1183.8499forward
CNT30577686Prunus dulcisOryza barthii30.6817.2584.62104forward

Expression of CNT3042659

Peptides detected in this lncRNA

>peptide 1 (49 aa)
MASATLAFKASGDSSKCKTSVWSISKSMPVTLAADSCSNWSTRGYKASPS

>peptide 2 (45 aa)
ILKKLQSLQHQTKTSAKDSPHSEETPDATLLIYETRLSFRDNEDS*

Sequence

>CNT3042659
TAATTTTAAAAAAGCTACAATCACTTCAACATCAAACGAAAACTTCTGCCAAAGACTCCCCACATAGCGAGGAAACACCAGATGCCACACTTCTCATTTA
TGAGACAAGGCTGTCATTCAGAGACAATGAAGATAGTTGATCAGCGCTGCTGTTAGCCTGCTGTTGGGCAACATTTCTCAGGACCTCCATGGCCTCTGCC
ACTTTGGCCTTCAAAGCCTCCGGCGACTCGAGCAAATGCAAAACTTCAGTCTGGTCCATCTCCAAAAGCATGCCTGTCACCTTAGCTGCTGACTCGTGCT
CCAACTGGTCAACTAGGGGATATAAAGCCTCACCAAGCA