Detailed information on CNT30562498


BLAST search results

BLAST vs Swiss-Prot:
sp|Q9LT82|MPC_ARATH, E-value = 2e-12

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30671879Actinidia chinensisSetaria viridis11.0430.6983.67147forward
CNT30520706Actinidia chinensisSetaria italica11.0424.0283.67147forward
CNT30615854Actinidia chinensisSesamum indicum8.7251.7986.21116forward
CNT3042659Actinidia chinensisPrunus dulcis5.1120.0688.2468forward
CNT3013060Actinidia chinensisZea mays9.6240.2584.38128forward
CNT30606636Actinidia chinensisGossypium raimondii6.6921.1986.5289forward
CNT30128674Actinidia chinensisCorymbia citriodora4.2123.6389.2956forward
CNT30577686Actinidia chinensisOryza barthii9.6921.3982.95129forward

Expression of CNT30562498

Peptides detected in this lncRNA

>peptide 1 (46 aa)
MQNLGLIHLQKHSSHLSCHLRLQLFHEWIQIFTQHLQLFTQQQELV*

>peptide 2 (73 aa)
SSALQEQHWQGQMPKRQWELVETFPRHAKACHPYHREQKACLQEHQTWKRDCHSKTVRPIDQRRCRPAAAEHS*

>peptide 3 (43 aa)
MLSNSPSNTKCKILFHDFIHPQVKIESTNIKILKCHYNLPTSI*

>peptide 4 (29 aa)
MTNTLILDFLNRPPWIYYIDLPQLDLRIY*

>peptide 5 (57 aa)
HPLLCRSSIGKGRCQSANGNWLRHSPVTQRHATHIIGNRKHASRNTRHGNETVIQRQ*

Sequence

>CNT30562498
CATCCTCTGCTCTGCAGGAGCAGCATTGGCAAGGGCAGATGCCAAAGCGCCAATGGGAATTGGTTGAGACATTCCCCCGTCACGCAAAGGCATGCCACCC
ATATCATAGGGAACAGAAAGCATGCCTCCAGGAACACCAGACATGGAAACGAGACTGTCATTCAAAGACAGTGAGGCCAATTGATCAGCGGCGTTGCCGG
CCTGCTGCTGCTGAACATTCCTGAGGACTTCCATAGCCTCCGCAACCTTTGCTTTTAGAGCTTCTGGCGACTCCAGCAGATGCAAAACCTCGGTCTGATC
CATCTCCAGAAGCATTCCAGTCACCTTAGCTGCCATCTCAGGCTCCAGCTGTTCCACGAGTGGATACAGATTTTCACCCAGCATCTACAATTGTTCACCC
AACAACAAGAACTCGTTTAGTTATTCATTCAGGACATTAGCATGGTACCAGAAATAGAGGTTTAATGCATTAAAACAGCAGTGAATATTTTTTGAATCAT
CATATGGTGCATGGATCCGAATGCTTTAGAGAACCTCTATTGTAGGATGATGTAAAATATAATACTGTTATTTGTTATATTACTAGTAGTAGAACTTCCA
ACTCTGCCCTAAAAAAAAGGTTTTGCCTCTTAGAATAAGAACATAATAATACAGAGCAATCCACAATATAAACTTGAATTCAATTTTTTTATTTGATCTG
GCAACTGTTTGTCAGACCATCAATATTAACAACTAGACTAACCTCCCCTTAGATTTATGACAAATACATTAATTTTGGATTTCTTAAACCGACCACCGTG
GATTTATTACATCGATCTCCCCCAACTGGACCTAAGAATTTATTAATACATACTTTTGTATCTTACAACCTCTCTCTCTCTGCGCGTGTGTCTCTCTCTC
GTGAGCGCACAACCACAAACTAACCCACCAAGTTAAAGCACCACTGCCGCCCTAAGAAGCACGGACACGGCAATTTTCAAAAAATGCAGGACACGACAGG
TGGGGACACGGCATATATATATAATCAAGGGTAGTTAAATAAGTGCAAGATAAATAAAAAAAAAACATGACATGTCTTCTATAACTTAAAGTATTAACAT
ATCATAAAACTAAAACATTAAAATGTTATCAAATTCACCATCTAACACAAAGTGCAAAATATTGTTTCATGATTTCATCCATCCACAAGTTAAAATTGAA
AGTACTAATATAAAAATATTAAAGTGTCATTACAATCTTCCAACTAGCATCTAATACAAAATTCATAAAGTTTTAAAATTCAAAATTCCAACTAGTTTCC
TTAGATTCTTTTTACAATTACATTCAATTTT