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Detailed information on CNT30128674


BLAST search results

BLAST vs Swiss-Prot:
sp|Q9LT82|MPC_ARATH, E-value = 3e-12

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30671879Corymbia citriodoraSetaria viridis42.6221.0982.18101forward
CNT30520706Corymbia citriodoraSetaria italica42.6216.582.18101forward
CNT3019796Corymbia citriodoraCitrullus lanatus22.789.7388.8954forward
CNT3042659Corymbia citriodoraPrunus dulcis33.7623.687.580forward
CNT30562498Corymbia citriodoraActinidia chinensis23.634.2189.2956forward
CNT3013060Corymbia citriodoraZea mays33.7625.1683.7580forward
CNT30606636Corymbia citriodoraGossypium raimondii27.4315.4886.1565forward
CNT3035726Corymbia citriodoraCucumis melo29.9617.8485.9271forward
CNT30577686Corymbia citriodoraOryza barthii23.639.2987.556forward

Expression of CNT30128674

Peptides detected in this lncRNA

>peptide 1 (45 aa)
MPPRLLPSVHPVTRADAKPQSGPFPKAYQSLWPHYRAPADPPTGIN

>peptide 2 (29 aa)
MQNLSLVHFQKHTSHFGRIIVLQLIHQRV*

Sequence

>CNT30128674
AGACACTTAAGAGACAAGGTTATCATTCAAGGATAGACCAGCCAACTGATCCACCGGGCTGTTAGCCTGCTGCTGAGAAGCGCTCCTCAGGACATCCAAT
GCCTCCTCGACTTTTGCCTTCAGTGCATCCGGTGACTCGAGCAGATGCAAAACCTCAGTCTGGTCCATTTCCAAAAGCATACCAGTCACTTTGGCCGCAT
TATCGTGCTCCAGCTGATCCACCAACGGGTATAAACT