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Detailed information on CNT30410641


BLAST search results

BLAST vs Swiss-Prot:
sp|Q9FXA2|PABP8_ARATH, E-value = 3e-11

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30629284Papaver somniferumVigna unguiculata11.9721.0987.162forward
CNT3042659Papaver somniferumPrunus dulcis19.1129.283.8499forward
CNT30606636Papaver somniferumGossypium raimondii17.9522.1486.0293forward

Expression of CNT30410641

Peptides detected in this lncRNA

>peptide 1 (49 aa)
MKGLQVDQQDCSSAVVPAAEQHSSKPPSLLQLLLLRLPETRASAKPQSG*

Sequence

>CNT30410641
CAGCGAACTCCAAAGATCCTACTACAATTACTGAAACAATAAAAGAAAATGGCCAATAAGTTTTACTCACTATCTTCCACACTACCAAAGCAACTCAACT
CAACTAAAATAGTATCAAAACCACAAACCTAAAAACTAGTAGTTCAAAGCTATCACCATAAAGTTTCTCCTCAATACAAGGACAGACCAAGCCGACAGGG
TTCTATCAACCGATGGTTTCGTTCAATGAAAGGGCTGCAAGTTGATCAGCAGGATTGCTCGTCTGCTGTTGTGCCTGCTGCTGAGCAACATTCCTCAAAA
CCTCCATCGCTTCTGCAACTTTTGCTTTTAAGGCTTCCGGAGACTCGAGCAAGTGCAAAACCTCAGTCTGGCTGAGCCATGGAAGCATCACGTAGCGGCA
TGCCACTCATATCATAAGGAACTGAAAGCATACCCCCAGCAACCCCTGGCATTGGAACCTCGGGCATGTTACGACCACCAGGTGGGTAACGGTACATACG
TCCCCTTGGCATCATCTG