Detailed information on CNT30616950


BLAST search results

BLAST vs Swiss-Prot:
sp|O22173|PABP4_ARATH, E-value = 3e-22

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30671879Sesamum indicumSetaria viridis33.129.0283.45139forward
CNT30520706Sesamum indicumSetaria italica33.122.7183.45139forward
CNT3019796Sesamum indicumCitrullus lanatus23.3317.6684.6998forward
CNT3042659Sesamum indicumPrunus dulcis23.3328.9186.7398forward
CNT3013060Sesamum indicumZea mays20.2426.7389.4185forward
CNT3035726Sesamum indicumCucumis melo19.7620.8584.3483forward
CNT30577686Sesamum indicumOryza barthii28.3319.7387.39119forward

Expression of CNT30616950

Peptides detected in this lncRNA

>peptide 1 (63 aa)
MLKKQGCRSVKVRQDIHRLSNLGFQSLRRFKQMQNLSLVHLQKHACNLRSMLMLQLINKRIQVL

Sequence

>CNT30616950
TTAATAAATCAACAAAACATAGAGCAAACTGAATGAAATGGCAACCAATATATTAAAAACACCAATCTTAAAAATCCAGGAATAATTTGGAAACCAAAAA
GATTATCTCTCGAGTTAAAAAACCTAAAAAACATTACCCAAAAATTCATCCGAAAATAGCACCCTCACTAGCAAAAAGTTGATTCAGATTGGCCAGGCCA
ATATCTGCAATCACTTAAAAGACCAGATGCTCAAGAAACAAGGTTGTCGTTCAGTGAAAGTGAGGCAAGACATCCATCGCCTCAGCAACCTTGGCTTTCA
AAGCCTCAGGAGATTCAAGCAAATGCAGAACCTCAGTCTGGTCCATCTCCAGAAGCATGCCTGTAACCTTCGCAGCATGCTCATGCTCCAGTTGATCAAC
AAGAGGATACAAGTTCTCAC