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Detailed information on CNT30421092


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30374815Papaver somniferumArabidopsis thaliana38.4762.2387.16257forward
CNT30158121Papaver somniferumPistacia vera32.6334.8881.65218forward
CNT30144140Papaver somniferumMedicago truncatula39.3770.5184.79263forward
CNT3082721Papaver somniferumBrassica juncea25.4558.8281.76170forward
CNT30624603Papaver somniferumDaucus carota39.8240.383.08266forward
CNT30571189Papaver somniferumVitis vinifera32.6335.3983.49218forward
CNT3025933Papaver somniferumPopulus trichocarpa36.9835.3981.78247forward
CNT30113343Papaver somniferumFicus carica21.5640.6882.64144forward

Expression of CNT30421092

Peptides detected in this lncRNA

>peptide 1 (62 aa)
MSQRHQLRSFISSITKHVTLVSSSNILWLLGKMTMNTLSNVRALLFNINKNLTFVSIKTNIS*

>peptide 2 (30 aa)
MLQTPKTHYQLREVSPRARFPRFFFSIMLN*

Sequence

>CNT30421092
AATAAATAAGAAAAAGCATTGAGCAGTTCATGTATTTAATTTCACTTGATTATATTATATGATCAAACAAATTGAAACATCCAAACAATTTGGTGCAGTA
AGAAACAATCACTGACTACTCGAAGAAAAGACATTTTCCCTTCAAGAGAAAAACAAGAACACAATAATAATAATAATAATAATAATAATGCTACAAACTC
CTAAAACCCACTACCAACTCAGAGAAGTTTCACCTCGGGCACGGTTTCCTCGCTTTTTTTTCTCAATTATGTTGAATTAAAAAGTACAGATAGATATGCT
GTTTCTTATATTCCCCATATAATTTCCTTATAAACGAGAATCAGAATCAAGCTTGCTTGAGGTTCTTGACAGTCTCCCAGGTGAAGTCAGGGTCGTCACG
GCCTCAACCAAGCGCAGGTACCGTTCTTCCTCACTTCAGTAAGCTTAGCTCCAAGCTTGGTAGCAAGGACATGAGTCAAAGGCATCAACTCAGGAGTTTC
ATCAGTAGCATAACCAAACATGTGACCTTGGTCTCCAGCTCCAATATCCTCTGGCTTCTTGGTAAGATGACCATGAACACCTTGAGCAATGTCAGGGCTC
TGTTGTTCAATATAAACAAGAACCTTACATTTGTCAGCATCAAGACCAACATCAGCTGAAACAAATCC