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Detailed information on CNT30374815


BLAST search results

BLAST vs Swiss-Prot:
sp|Q9LUT2|METK4_ARATH, E-value = 1e-95

BLAST vs NONCODE:
NONPOPT000587, E-value = 4e-37

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30673492Arabidopsis thalianaSetaria viridis89.137.7879.35368forward
CNT30521128Arabidopsis thalianaSetaria italica86.9249.0479.67359forward
CNT30266655Arabidopsis thalianaChenopodium quinoa47.717.5382.23197forward
CNT30495282Arabidopsis thalianaOlea europaea38.989.1483.85161forward
CNT30711739Arabidopsis thalianaGlycine max73.1225.2381.79302forward
CNT3047442Arabidopsis thalianaPrunus dulcis84.2657.4383.05348forward
CNT30158121Arabidopsis thalianaPistacia vera90.5659.8481.02374forward
CNT30225130Arabidopsis thalianaHordeum vulgare67.3165.8879.86278forward
CNT30174161Arabidopsis thalianaTrifolium pratense37.5319.6586.45155forward
CNT30144140Arabidopsis thalianaMedicago truncatula78.9387.483.74326forward
CNT30662024Arabidopsis thalianaTriticum dicoccoides81.1165.9480335forward
CNT30471855Arabidopsis thalianaSaccharum spontaneum62.9528.2681.54260forward
CNT30650534Arabidopsis thalianaRosa chinensis91.2840.4580.64377forward
CNT30212612Arabidopsis thalianaHelianthus annuus38.7466.3988.12160forward
CNT30355133Arabidopsis thalianaLactuca sativa47.9422.6381.31198forward
CNT30421092Arabidopsis thalianaPapaver somniferum62.2338.4787.16257forward
CNT30571189Arabidopsis thalianaVitis vinifera91.2861.282.76377forward
CNT3022365Arabidopsis thalianaPopulus trichocarpa99.2780.7181.22410forward
CNT30101810Arabidopsis thalianaOryza rufipogon40.686.6382.14168forward

Expression of CNT30374815

Peptides detected in this lncRNA

>peptide 1 (41 aa)
SLRSAAISSLVTVSSCCVEMRTVWTRTGTMAPLSLMYSIVT*

Sequence

>CNT30374815
TCCTTAAGATCAGCTGCGATCTCATCGTTAGTCACAGTCTCGTCATGCTGTGTTGAGATGAGAACAGTGTGGACACGTACAGGAACCATGGCTCCGCTTT
CGTTGATGTACTCAATAGTGACTTGAGTCTTACCATCTGGCCTCAACCAAGGGCAAGTTCCATTCTTGCGAACTTCAGTGAGTTTAGCTCCAAGCTTAGT
AGCGAGAACGTGAGTAAGAGGCATGAGCTCAGGAGTCTCATCAGTAGCATACCCAAACATGTGACCTTGGTCACCAGCTCCAACCTCCTCTGGCTTCTTG
GTGAGATGACCATGAACACCTTGTGCAATGTCAGGACTCTGTTGCTCAATGTTAACCAGAACCTTGCAATTGTCAGCATCTAGACCAACGTCAGCAGAGA
CGAATCCAATCTC