Detailed information on CNT30364459


BLAST search results

BLAST vs Swiss-Prot:
sp|Q6ENW6|ATPA_SACOF, E-value = 2e-46

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30710758Sorghum bicolorGlycine max42.5458.1985.06174forward
CNT30223113Sorghum bicolorHordeum vulgare25.9234.1993.4106forward
CNT30541468Sorghum bicolorBrassica napus32.523.8981.2133forward
CNT30554216Sorghum bicolorOryza glaberrima23.9615.0385.7198forward
CNT30660677Sorghum bicolorTriticum dicoccoides23.967.3589.898forward
CNT30689283Sorghum bicolorTriticum urartu100.4916.291.24411forward
CNT30353938Sorghum bicolorEragrostis tef100.9871.0889.35413forward
CNT30371010Sorghum bicolorOryza glumipatula74.0833.1591.75303forward

Expression of CNT30364459

Peptides detected in this lncRNA

>peptide 1 (54 aa)
EQFFLLFLQNFPLVSSTHRPLIQPQYFWISNSEQYLSSLLQIRLIHLTLFHQDL*

Sequence

>CNT30364459
TGAGCAATTCTTTCTGTTGTTTTTACAAAACTTCCCTCTTGTATCATCAACCCATCGTCCATTAATACAACCCCAATATTTTTGGATTTCAAATTCAGAG
CAATACCTCTCGTCACTTCTACAAATTCGACTAATTCACCTGACATTATTTCACCAAGACCTATAATACGAGCAGTCCCATCCCCCACTTGCACTATGTG
ACCGATATTCTCAATCCCTACTTTCCTATTATATTGTTCAATACGTTCGCAGAGAATTTTATTAATTTCGTCGACTCGAAGGTTGCCATTAGTGTTTCTT
TATTTTTTTGGAAGCAAGGGAAAAATAATGCATAAATTCTAAACAAAAGTAGAAGTTCAAAATATAATAAATTTAATTATCTCTTCCATTCTATGGCCCC
GAGAATCTC